Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 759 a.a., putative two-component sensor histidine kinase/response regulator hybrid protein from Phaeobacter inhibens DSM 17395

 Score =  234 bits (598), Expect = 9e-66
 Identities = 155/458 (33%), Positives = 253/458 (55%), Gaps = 32/458 (6%)

Query: 283 ILLLCVMVGYFLISHYWIRPIVLIAKKVSES---REGEIIDIRYKSQDEIRHLI------ 333
           IL L V++   L+S   +RP+ +I +++S +     G    + + +  E R L       
Sbjct: 156 ILSLLVLI---LVSVLALRPLQIIHQRMSGAIAGLSGLQARLPWFASREFRALNFSVGVL 212

Query: 334 -DTFNQKT---IYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTS 389
            DTF+++      LE  +  A  + +AKS FLA +SHEIRTPMNGV+G A+++L+ +L  
Sbjct: 213 EDTFSERDEREYALEEARKAADIANRAKSEFLANMSHEIRTPMNGVIGMAELILETDLDE 272

Query: 390 KQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVE 449
            Q  +  ++ +SG  +++++N+IL++SKIE GK EL+ + F L++ I  + ++ S    E
Sbjct: 273 DQTMYAETISKSGSALLTIINDILNFSKIEAGKMELERAPFNLQTAIEDVVTLLSPKAAE 332

Query: 450 KGLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLI 509
           K ++  L  + +    Y GD  R+RQI+ N+  NAVKFT  G+V I +S E+ D+   L 
Sbjct: 333 KNVEVTLRYDPSLPECYEGDVGRIRQILTNVAGNAVKFTGKGYVYIEVSGETDDDRTALR 392

Query: 510 IKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEV 569
           I V DTG GI ++ L RIF  FEQA+   TR + GTGLGLAI  ++ ELM G + VQSE+
Sbjct: 393 ISVTDTGAGIPEDRLDRIFNAFEQADGAATRNYEGTGLGLAISTRLLELMGGRISVQSEL 452

Query: 570 GQGSCFKVRVKLAITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECH 629
           G+GS F + + L I    ++  +   A+ + GLR L+V+D   N +IL   +   G +  
Sbjct: 453 GKGSVFAIDLPLRIRP--SQPKRAQDARDFKGLRALVVDDLELNRIILTERLATWGVQSV 510

Query: 630 SVMDGVQAITALQES-----SFDLVLMDNHMPLKDGIQATREIRQLP----LPQAKILLF 680
           +     QA+  L +S      +D++L D  MP  DG +    IR +P    LP   ++L 
Sbjct: 511 AAGSAHQALELLLDSRHDGTHYDVILQDFQMPGMDGKELAERIRDIPEYRDLP--IVILS 568

Query: 681 GCTADVFKDTRDKMLSAGADDIIAKPIAEHELDMALEQ 718
                + ++ R+ +   G  ++  KP+   +L   + +
Sbjct: 569 SVENTIDREAREHL---GRCEVALKPLRAAQLQSVMSR 603



 Score = 85.1 bits (209), Expect = 1e-20
 Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 4/139 (2%)

Query: 578 RVKLAITEPVTEDVKPTKAKT--YPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGV 635
           RV    TE   + V P   +T   P +++L+ EDNRTN +++   ++    E     +G 
Sbjct: 603 RVLETATEEAPQAVPPQGVETSVVPEVKLLLAEDNRTNQLVVSRMLKAAPIEVLIAANGE 662

Query: 636 QAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQ--AKILLFGCTADVFKDTRDK 693
           +A+T  QE   D+VLMD  MP+KDGI AT EIRQL       +  +   TA+  +  R++
Sbjct: 663 EAVTMFQEHHPDIVLMDMMMPVKDGIDATAEIRQLEKDNGLGRCPVVALTANALQSHREE 722

Query: 694 MLSAGADDIIAKPIAEHEL 712
            L+AG DD ++KPI +  L
Sbjct: 723 CLAAGMDDFLSKPINKKAL 741