Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 764 a.a., signal transduction histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  222 bits (566), Expect = 5e-62
 Identities = 142/424 (33%), Positives = 237/424 (55%), Gaps = 14/424 (3%)

Query: 295 ISHYWIRPIVL-IAKKVSESREGEIIDIRYKSQDEIRHLIDTFN--QKTIYLEAEKVKAQ 351
           +S  W+ P    +  ++ + R   ++D R    D +   +D  +  Q    L+A + +A+
Sbjct: 151 MSERWLSPSPEPVVVRMWDDRYLRLLDQRGHGGDMVSLALDITSTVQYEEELQAARERAE 210

Query: 352 ASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGEHMMSLLNE 411
           A+ +AKSAFLA +SHEIRTPMNGV+G A++L    L+ +Q+ +  ++  SGE ++ ++N+
Sbjct: 211 AANRAKSAFLANMSHEIRTPMNGVVGMAELLSDTNLSDEQQLYANTIKNSGEALLVIIND 270

Query: 412 ILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITDGRWYYGDKA 471
           +LDYSKIE  K EL    F L+  +  +  +      +KGL   L+ ++     + GD  
Sbjct: 271 VLDYSKIEAQKLELHPEPFDLERSVHEVLMLLQPTARDKGLTLLLDYDLFLPTSFVGDPG 330

Query: 472 RLRQIIFNLLSNAVKFTEAGFVAIGLS--EESCDEENYLIIKVQDTGIGIAQESLGRIFR 529
           R+RQ++ NL+ NAVKFT  G VA+ ++    + D+   + + ++DTGIGI +E +  IF 
Sbjct: 331 RIRQVLTNLVGNAVKFTSEGHVALQITGISNAGDKICSIHVTIEDTGIGIPEEKVQDIFG 390

Query: 530 PFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLAITEPVTE 589
            F Q E    R+F GTGLGLAI K++ ELM G + V+S+ G+GSCF  R++L + E  + 
Sbjct: 391 EFNQVEDERNRQFEGTGLGLAISKRLIELMGGEIWVESQEGKGSCFGFRMELPLAEGAST 450

Query: 590 DVKPTKAKTYPGLRVLIVEDNRTNIM-ILEAFMRNKGFECHSVMDGVQAITALQESSFDL 648
            + PT  K   GL  + V D+++ +  +L   +   G E     +G  AI  + +   DL
Sbjct: 451 SI-PTLPK---GLCQIAVIDSQSVMRDVLSKQLAMLGLEVTVFDNGAAAIAGMPD-GVDL 505

Query: 649 VLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPIA 708
           V+ D  +P ++G++  +++R  P  Q  IL+   ++D    +   + S   D ++ KPI 
Sbjct: 506 VVCDEQLPDQNGVELAQKLRSGPFAQVPILML--SSDPTAPSNSDVQSV-TDSVLLKPIQ 562

Query: 709 EHEL 712
             EL
Sbjct: 563 RDEL 566



 Score = 63.2 bits (152), Expect = 5e-14
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 1/107 (0%)

Query: 602 LRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGI 661
           +RVL  EDNRTN ++    +++   +   V +G++A+   Q    DL+ MD  MP+ DG 
Sbjct: 627 MRVLAAEDNRTNQLVFRKMVKDLNIDLQFVSNGIEAVEVYQSFQPDLIFMDISMPVMDGK 686

Query: 662 QATREIRQLPLPQAKIL-LFGCTADVFKDTRDKMLSAGADDIIAKPI 707
           +AT++IR L         +   TA       D +L+AG D  + KP+
Sbjct: 687 EATQKIRALEHGTGIYTPVVALTAHAMAGDSDGILAAGLDHYLTKPL 733