Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1768 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  239 bits (610), Expect = 9e-67
 Identities = 136/371 (36%), Positives = 212/371 (57%), Gaps = 7/371 (1%)

Query: 343  LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
            L   K  A A++KAKS FLA +SHEIRTPMN ++G +Q+ L+  L  KQ+ ++  +  + 
Sbjct: 1026 LTQAKDVADAASKAKSDFLANMSHEIRTPMNAIIGMSQLCLQTSLDKKQQNYVEKIDRAS 1085

Query: 403  EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITD 462
            + ++ ++N+ILD+SKIE GK +++   F L +++  +  ++S    +K L+         
Sbjct: 1086 KSLLGIINDILDFSKIEAGKLDIEAVPFQLDTMLEDLSDMFSVKAADKQLELLFAVAPNI 1145

Query: 463  GRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSE-ESCDEENYLIIKVQDTGIGIAQ 521
             R   GD  RL Q++ NL++NA+KFTE G V + +S+    DEE  L   V+D GIG+ +
Sbjct: 1146 PRHLVGDPLRLSQVLINLMNNAIKFTEQGEVMLSISQLVREDEEILLKFSVRDNGIGLTE 1205

Query: 522  ESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKL 581
            E  G++F+ F QA+S TTR++GGTGLGLAI KQ+ ELM G + V+S+ G GS F   V+ 
Sbjct: 1206 EQRGKLFQSFSQADSSTTRKYGGTGLGLAICKQLVELMGGEIGVESQFGNGSTFFFSVRF 1265

Query: 582  AITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITAL 641
             + +     V    A+   G+R+L+ +DN T   IL + + + GF   +V  G +A++  
Sbjct: 1266 KVADNQLIKV----AQELEGMRILVADDNATARDILRSTLESMGFTVDTVRSGAEALSRC 1321

Query: 642  QESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADD 701
            QE+ + + L+D  MP  DG++  R +        K L+    AD   D  DK   A    
Sbjct: 1322 QETDYGVALIDWRMPEMDGLETARRLLSERTNPPKTLIVSAHAD--GDFIDKAEQAEISG 1379

Query: 702  IIAKPIAEHEL 712
             I KPI+   L
Sbjct: 1380 YITKPISASRL 1390



 Score = 75.5 bits (184), Expect = 2e-17
 Identities = 50/143 (34%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 565  VQSEVGQGSCFKVRVKLAITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNK 624
            + S +G+     VR K         +V P       G R+L+VEDN  N  +   F+   
Sbjct: 1394 IMSALGKQGAMPVRRK-------GSEVSPALLAQLKGKRILLVEDNEMNQEVASEFLEQV 1446

Query: 625  GFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTA 684
            G       +G  A+  L   SFDLVLMD  MP+ DG QAT E+R+ P   A + +   TA
Sbjct: 1447 GVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQATAELRKRP-ELADLPVIAMTA 1505

Query: 685  DVFKDTRDKMLSAGADDIIAKPI 707
            +     ++  L AG +D IAKPI
Sbjct: 1506 NAMAGDKEMCLRAGMNDHIAKPI 1528



 Score = 33.9 bits (76), Expect = 7e-05
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 3/66 (4%)

Query: 152 SWYLAAEREAEGLYFWSPVYVDPYT-RVEMITVSTPYYRNGQFAGVATVDLSLESLIQFV 210
           +W+  A  + +G  +WS  Y D     + MIT S P+  +  + GV TVDL+L++L    
Sbjct: 153 AWWSEAIDKPQG--YWSLPYFDEGAGNILMITFSHPFGPSSPYWGVVTVDLALDALPAMA 210

Query: 211 AATAEQ 216
              A++
Sbjct: 211 GIDADR 216