Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  235 bits (599), Expect = 9e-66
 Identities = 139/387 (35%), Positives = 217/387 (56%), Gaps = 11/387 (2%)

Query: 330 RHLIDTFNQKTIYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTS 389
           + L +   ++T  LE  K  A+++  AKSAFLA +SHEIRTP+N + G   ++ +  L  
Sbjct: 539 QRLEELVQERTRQLEELKDAAESANVAKSAFLANMSHEIRTPLNAMTGLTHLIRRAGLKP 598

Query: 390 KQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVE 449
           +Q +H+  L  + +H++ ++N ILD SKIE GKF L+ +   ++S++G++ S        
Sbjct: 599 QQAEHMDKLEAAAQHLLGVINAILDLSKIEAGKFALEEAPVRVESLLGNVASFLQERVQA 658

Query: 450 KGLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGL-SEESCDEENYL 508
           KGL  +  ++        GD  RL+Q + N   NA+KFTE G + + + + E  + +  L
Sbjct: 659 KGLVLRTEAQPLPPH-LLGDPTRLQQALLNYAGNALKFTEQGSITLRVHTLEEGEADALL 717

Query: 509 IIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSE 568
             +VQDTGIGI  E++ ++F  FEQA++ TTRR+GGTGLGLAI +++A+LM G     SE
Sbjct: 718 RFEVQDTGIGIPPEAMHKLFSAFEQADNSTTRRYGGTGLGLAITRKLAQLMGGEAGASSE 777

Query: 569 VGQGSCFKVRVKLAITEPVTEDVKPTKA--------KTYPGLRVLIVEDNRTNIMILEAF 620
            G+GS F    +L   +    +  P           + + G  VL+ ED   N  I +  
Sbjct: 778 PGRGSTFWFTARLKKGKERYGNGAPLAGGNAEQRLRQEFAGRTVLLAEDEPINQEITKFM 837

Query: 621 MRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLF 680
           + + G       DG  A+   + + + L+LMD  MPL DG+ ATREIRQL   +   +L 
Sbjct: 838 LEDVGLRVELAPDGKVAVERARGNDYALILMDMQMPLMDGLDATREIRQLQRHRQTPIL- 896

Query: 681 GCTADVFKDTRDKMLSAGADDIIAKPI 707
             TA+ F + + + L AG +D IAKP+
Sbjct: 897 AMTANAFAEDKARCLGAGMNDFIAKPV 923