Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  214 bits (546), Expect = 8e-60
 Identities = 122/389 (31%), Positives = 206/389 (52%), Gaps = 20/389 (5%)

Query: 339 KTIYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSL 398
           +T  LE  +V+A+++ +AK+ FLA +SHE+RTP+NG++G  ++LL      +Q + L  +
Sbjct: 165 RTHELEQARVEAESANRAKTQFLANISHELRTPLNGIIGLTELLLAAGPAGEQEECLGMV 224

Query: 399 YESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNS 458
            ++G  ++S++N +LD S IE G+  L+ + F L+  +G +  +       K L    + 
Sbjct: 225 RQAGLDLLSIVNNLLDMSSIEAGRIALNEAPFNLRETVGDLVRVLDVQARWKNLTLACSV 284

Query: 459 EITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAI----------------GLSEESC 502
                    GD ARLRQ++ NL+ N +K+TE G V++                G      
Sbjct: 285 SPDVPDRLVGDAARLRQVLTNLVINGIKYTEVGGVSLSVELDGALPPVPGAGQGAHAAHA 344

Query: 503 DEENYLIIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGT 562
                L + V+DTG+GIA E   RIF PF  AE+  T+++GG GLGLAI ++IA +M G 
Sbjct: 345 GGPVGLRVTVEDTGVGIASEKWERIFEPFTLAENFLTKKYGGAGLGLAISREIARMMGGD 404

Query: 563 VLVQSEVGQGSCFKVRVKLAITEPVTEDVKPTKAKTYPG----LRVLIVEDNRTNIMILE 618
           + V+S+ G GS F + ++ A+ E V    +        G    LR+++ ED+  N  +  
Sbjct: 405 IAVRSQEGAGSTFVLTMRFALGESVAPRPRDASLPVIRGVNRRLRIMVAEDDVINRKLAL 464

Query: 619 AFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKIL 678
            F    G +  +V  G++ +  L+  + DL+LMD  MP  DG++  R +R      +++ 
Sbjct: 465 YFFERMGHDVITVSSGIEVLAGLEREACDLLLMDIQMPEMDGLETIRALRGRKGVPSRVP 524

Query: 679 LFGCTADVFKDTRDKMLSAGADDIIAKPI 707
           +   TA      R++ L+ G D  ++KP+
Sbjct: 525 VIAMTAHAMAGDRERFLAEGMDGYVSKPV 553



 Score = 44.3 bits (103), Expect = 2e-08
 Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 12/122 (9%)

Query: 604 VLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQA 663
           V++++D+      + A++ + G+  H   DG   +  ++    D VL+D  MP  DG+  
Sbjct: 28  VVVIDDDTMVRRSITAYLEDLGYNVHEGTDGRTGLALVRSVQPDAVLVDLRMPGIDGLDV 87

Query: 664 TREI--RQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPIAE-----HELDMAL 716
            RE+   +  +P   +   G   D  +  R      GA D I KPI +     H + +A+
Sbjct: 88  LRELATERPDMPTIVVSGTGVMQDAIEAVR-----RGAWDFILKPIMDLEVLGHRVRLAI 142

Query: 717 EQ 718
           EQ
Sbjct: 143 EQ 144