Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 955 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  207 bits (526), Expect = 3e-57
 Identities = 128/373 (34%), Positives = 197/373 (52%), Gaps = 5/373 (1%)

Query: 350 AQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGEHMMSLL 409
           A+A+ KAKS FLA +SHEIRTP+NGVLG  Q+L    LTS Q++ L    +S  ++++++
Sbjct: 564 AEAANKAKSIFLANMSHEIRTPLNGVLGMLQLLEDAPLTSDQQELLHVASQSSRNLLTVI 623

Query: 410 NEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITDGRWYYGD 469
           N+ILD++++           F     + +++   ++   +K ++ + +          GD
Sbjct: 624 NDILDFTRLGSVAPSFASDPFDAAGALYTVRDTLATGAKDKDIRIETDISPNVPPLLIGD 683

Query: 470 KARLRQIIFNLLSNAVKFTEAGFVAI---GLSEESCDEENYLIIKVQDTGIGIAQESLGR 526
             R RQI+FNL+ NAVKFT+ G V I   GL   S      +++ V+D+GIGI Q+ LG 
Sbjct: 684 VTRFRQILFNLVGNAVKFTQQGTVRISLHGLERHSPAGALRMLLMVEDSGIGIPQDMLGN 743

Query: 527 IFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLAITEP 586
           +F PF Q +    RR+ GTGLGL IV+ +   M GT+ + SE G G+     +     E 
Sbjct: 744 VFEPFFQVDGSYRRRYPGTGLGLGIVRSLVHGMGGTIAIDSEEGAGTTIACTLMFGRIEK 803

Query: 587 VTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSF 646
             E V     +T  GL+VL+VED+  + +     +   G         V+ I  L++ +F
Sbjct: 804 TPEGV-TEGFETGAGLKVLVVEDDHISRVAASRMLERLGHYPVVASSAVEGIAMLRQQTF 862

Query: 647 DLVLMDNHMPLKDGIQATREIRQLPLPQAK-ILLFGCTADVFKDTRDKMLSAGADDIIAK 705
           D VLMD  MP  DG++ T  +R   +P  + I +   TA V  + R   +S G    +AK
Sbjct: 863 DCVLMDIQMPEMDGLELTEALRSGLVPGVEDIPVLALTAHVLTEERRDFMSRGISGYLAK 922

Query: 706 PIAEHELDMALEQ 718
           P+    L  AL Q
Sbjct: 923 PLEMDILAKALTQ 935