Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., sensor histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  211 bits (538), Expect = 7e-59
 Identities = 136/402 (33%), Positives = 208/402 (51%), Gaps = 28/402 (6%)

Query: 343 LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
           ++  +  A+ ++ AK++FLA +SHEIR  +NG++G  +++L   L+ +QR+ L ++  S 
Sbjct: 128 IDEARQAAEHASLAKTSFLAGMSHEIRNTLNGIVGMTELVLDTPLSGEQRESLNTVLASS 187

Query: 403 EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKG--LKFQLNSEI 460
           E +++LL+++LD+S++E  +  L    F L  ++  +     S    K   L F++  ++
Sbjct: 188 ETLLTLLHDVLDFSRLEARQLRLVERPFSLDRLLKQVVQASRSEAERKNISLDFRVTPDV 247

Query: 461 TDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENY------------- 507
            D     GD  RL Q++ NL+ NAVKFT  G V I +S    D+                
Sbjct: 248 PDR--LTGDATRLTQVLANLVGNAVKFTHKGSVIIEVSAIPQDQTLLESLFPDGPPSSLT 305

Query: 508 LIIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQS 567
           L+  ++DTGIGIA E L  IF  F Q    T +R+GGTGLGLAI + + E+M G++  +S
Sbjct: 306 LLFSIRDTGIGIADEHLRTIFEAFSQGAEETVQRYGGTGLGLAICRNLVEIMGGSIWARS 365

Query: 568 EVGQGSCFKVRVKL-----AITEPVTEDVKPTKAKTYPG----LRVLIVEDNRTNIMILE 618
             GQGS F    +L     AI  P      PT + T       LRVL+V+D+ T   I  
Sbjct: 366 SEGQGSSFHFTCRLRPETPAINTPSEHAQAPTSSATPASGARPLRVLVVDDDATGRTITC 425

Query: 619 AFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIR--QLPLPQAK 676
             +R +G  C    DG  A+  L    FDLVL+D  M    G++  R IR  Q P     
Sbjct: 426 KMLRKRGHVCACAHDGATALQRLTADRFDLVLLDVKMHPMGGLELLRRIRNAQYPGVDRN 485

Query: 677 ILLFGCTADVFKDTRDKMLSAGADDIIAKPIAEHELDMALEQ 718
           I +   TA   K  R++ L++G  D IAKPI     +  L++
Sbjct: 486 IPVVAVTAHALKGDRERFLASGMTDYIAKPINARAFNAMLDR 527



 Score = 45.8 bits (107), Expect = 7e-09
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 7/120 (5%)

Query: 600 PGLRVLIVEDNRTNIMILEAFMRNKGFECHSV-MDGVQAITALQESSFDLVLMDNHMPLK 658
           P LR+++V+D +   + L   +   G+   +V  D   AI A +    DLVLMD  +   
Sbjct: 2   PNLRIIVVDDEQIVALDLRRTLEGLGYIVPAVETDADGAIDAAKRLRPDLVLMDIRLRRG 61

Query: 659 DGIQATREI-RQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPIAEHELDMALE 717
           DG+ A   I  Q  +P   +  F   A     T  + + AG    + KP AE EL   +E
Sbjct: 62  DGVDAAHVITNQFDIPVVFLTAFSDEA-----TLSRAMKAGPFGFLVKPFAERELYSTIE 116