Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., PAS-family sensor histidine kinase from Caulobacter crescentus NA1000

 Score =  246 bits (628), Expect = 3e-69
 Identities = 149/384 (38%), Positives = 212/384 (55%), Gaps = 8/384 (2%)

Query: 338 QKTIYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTS 397
           Q    L A +  A A+ + KS FLA +SHEIRTPMNGVLG   +L  ++L+   R+ LT 
Sbjct: 247 QNVTELVAARDAALAAAETKSQFLANMSHEIRTPMNGVLGVLHLLKTEKLSDDGRRLLTE 306

Query: 398 LYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLN 457
               GE + +LLN+I+D+SKIE GK EL         ++  +  +  +    KGL  ++ 
Sbjct: 307 ALSCGEMLSALLNDIIDFSKIEAGKLELSAEPVCPAELLRGVADMLRAQAETKGLYLRVE 366

Query: 458 SEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEEN----YLIIKVQ 513
           +   D  W   D  RLRQ +FNL+ NAVKFT  G V   LS    D  +     L  ++ 
Sbjct: 367 AS-DDLGWVATDPLRLRQALFNLIGNAVKFTLEGGVVARLSGRRIDSPDGARLRLRFEID 425

Query: 514 DTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGS 573
           DTG+GI +E+  R+F  F Q +  TTRRFGG+GLGLAI +++AELM G V  +S++G+GS
Sbjct: 426 DTGVGIGEEAGARLFERFRQGDGSTTRRFGGSGLGLAICRRLAELMGGEVGFESQLGKGS 485

Query: 574 CFKVRVKL-AITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVM 632
            F + V+  A   P T++        + GL VL+VEDN TN +I    +   G    +  
Sbjct: 486 TFWLEVETQACARPDTQETL-ADGPLFDGLHVLLVEDNATNRLIATRMLEALGARVTTAE 544

Query: 633 DGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRD 692
           DG Q + A ++  FDL+LMD  MP+ DG++AT  IR    P     +   TA+     + 
Sbjct: 545 DGAQGVAAARQ-GFDLILMDIQMPVMDGVEATHRIRAFNSPAGAAPILAMTANAMAHQQA 603

Query: 693 KMLSAGADDIIAKPIAEHELDMAL 716
             L+AG D  IAKP++   L  A+
Sbjct: 604 SYLAAGMDGAIAKPLSPLALTQAI 627