Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 839 a.a., hybrid sensor histidine kinase/receiver domain protein from Caulobacter crescentus NA1000

 Score =  214 bits (546), Expect = 1e-59
 Identities = 138/396 (34%), Positives = 216/396 (54%), Gaps = 10/396 (2%)

Query: 324 KSQDEIRHLIDTFNQKTIYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILL 383
           + ++    L+ +  Q+     AE  +A    +AKS FLA +SHE+RTP+NGV+     L 
Sbjct: 446 RQRERNEELLRSLEQRVAVRTAELERAN---QAKSVFLANMSHELRTPLNGVIAIGDRLA 502

Query: 384 KDELTSKQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIY 443
           ++E    +R+  + +  SG  +  +L +ILD SKIE G+F+L  + F L  ++ S+  ++
Sbjct: 503 EEEDPQARRELASLVTSSGRLLEQVLGDILDVSKIEAGQFQLSPAPFDLVQLVRSMAELH 562

Query: 444 SSLCVEKGLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCD 503
           ++    K L  + +        Y GD  R+ QI+ NLL+NAVKFT  G V++ +  +   
Sbjct: 563 AAAAKAKQLSLRWSVSPDAEGSYDGDAGRISQILSNLLANAVKFTAKGEVSLEVDRQG-- 620

Query: 504 EENYLIIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTV 563
               L   V+DTG+G       R+F+ F QA+   TR+FGGTGLGL+I   +AE+M G++
Sbjct: 621 --EALRFVVRDTGVGFDDAVRDRLFKRFVQADQSITRQFGGTGLGLSICAALAEMMQGSI 678

Query: 564 LVQSEVGQGSCFKVRVKLAITEPVTE-DVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMR 622
              +  GQG+ F+V + L     V +  V+  +  +  G+RVL+ ED+ TN  ++E  + 
Sbjct: 679 SADAVPGQGARFEVVLPLPRCAEVADVAVEEDREISLEGMRVLVAEDHPTNRKVVEIVLE 738

Query: 623 NKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQA--KILLF 680
             G +   V DG  A+ AL++  FD VLMD  MP+ DG+ ATR IR          IL+ 
Sbjct: 739 PFGVDLTMVEDGQAALDALEQGRFDAVLMDMQMPVMDGLSATRAIRAREKASGAWPILVV 798

Query: 681 GCTADVFKDTRDKMLSAGADDIIAKPIAEHELDMAL 716
             TA+  ++      SAGAD  +AKP+   +L  AL
Sbjct: 799 MLTANAMEEHVAAARSAGADLHLAKPLHPAQLLEAL 834



 Score = 30.0 bits (66), Expect = 5e-04
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 173 DPYTRVEMITVSTPYYRNGQFAGVATVDLSLESLIQFVAATAEQYNLGVNLKDAFGVEVV 232
           DP  R       TP+Y  GQF G     LSL+S +  + A A+    G N+  A   EVV
Sbjct: 245 DPSGRGLNAACMTPFYYKGQFMGAFGTSLSLDSYL--LRAVADALPGGSNMIVADDGEVV 302

Query: 233 S 233
           +
Sbjct: 303 A 303