Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., PAS-family sensor histidine kinase from Caulobacter crescentus NA1000

 Score =  222 bits (565), Expect = 5e-62
 Identities = 138/394 (35%), Positives = 222/394 (56%), Gaps = 6/394 (1%)

Query: 334 DTFNQKTIYLEAEKV--KAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDE-LTSK 390
           D   +K + L+  K    A+A++ AKS FLA ++HE+RTP+  ++G A++L +   L   
Sbjct: 209 DITERKRLELDIAKALQMAEAASAAKSDFLANMTHELRTPLTAIIGFAEVLRRSRNLNKT 268

Query: 391 QRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEK 450
             + +  + ++   ++S++N++LD+S++E G  ELD + F   ++  S   + +     K
Sbjct: 269 AARQVGHILDASNTLLSVVNDVLDFSRLEAGGLELDPAPFDPAAMASSCAGLVAERAEAK 328

Query: 451 GLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLII 510
           GL  ++ +     +    D  RL Q++ N LSNAVKFT  G + + L +    ++  L  
Sbjct: 329 GLAVEVRAP-RGLKPMNLDGPRLSQVLLNFLSNAVKFTSHGAITVALRQTIDGDQAVLRG 387

Query: 511 KVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVG 570
           +V DTGIGIA E    IF  F QA++  +RRFGGTGLGLAI ++I E M+G + V S  G
Sbjct: 388 EVTDTGIGIAPEHRENIFDRFSQADAAVSRRFGGTGLGLAISRRIIERMDGRIGVDSVEG 447

Query: 571 QGSCFKVRVKLAITE-PVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECH 629
           QGS F   V+  + + P  E V+ +      G+R+L+VEDN  N  ++ A +   G    
Sbjct: 448 QGSTFWFEVRGPLADLPTQEAVETSPLDADAGVRLLLVEDNAVNRELICAILEPFGVAIE 507

Query: 630 SVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQ-AKILLFGCTADVFK 688
           +  DGV  + A+++  +DLVLMD  MP+ DG+ ATREIR +   + A   +   TA+V  
Sbjct: 508 TANDGVAGVEAMRQGHYDLVLMDVQMPMMDGLTATREIRAMEGARGASTPIIAMTANVLP 567

Query: 689 DTRDKMLSAGADDIIAKPIAEHELDMALEQHSER 722
           +     ++AG DD + KPI+  +L  A+ + S R
Sbjct: 568 EQVANCMAAGMDDHLGKPISPAKLLEAVARWSGR 601