Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., two component sensor histidine kinase from Caulobacter crescentus NA1000

 Score =  224 bits (570), Expect = 1e-62
 Identities = 140/390 (35%), Positives = 217/390 (55%), Gaps = 4/390 (1%)

Query: 335 TFNQKTIYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQH 394
           T  Q+   LE  K +A+A+++AKS FLA +SHE+RTP+NG+LG +Q L  + L   +R+ 
Sbjct: 179 TNGQQGRALELAKSQAEAASQAKSEFLALMSHELRTPLNGMLGLSQALKLEPLEPGEREQ 238

Query: 395 LTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKF 454
           +  L ESG  +++LLN++LD +KIE GK ++  +   L  +   +  I  +   EKG + 
Sbjct: 239 VELLEESGRTLLALLNDVLDMAKIEAGKLDIAPTQEDLSRLAERVVRINQAQAREKGTEI 298

Query: 455 QLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLIIK--V 512
            L  +    R    D  R+RQ + NL+SNAVKFT AG + + ++ E+ D+ + ++ K  V
Sbjct: 299 TLEIDPATPRALLFDPLRVRQCLGNLVSNAVKFTPAGQIRVRVTCEAGDQPDRMLAKIIV 358

Query: 513 QDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQG 572
            DTG+G+    L RIF PFEQA+    RR GGTGLGL I +++A++M G+V V+S  G+G
Sbjct: 359 SDTGVGMGPAVLARIFTPFEQADPTIARRTGGTGLGLNITRRLAQMMGGSVSVRSTEGKG 418

Query: 573 SCFKVRVKLAITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVM 632
           S F +     +      +     +  +P LR+L+V+D   N  ++   +   G E     
Sbjct: 419 STFTLTFGCRLPSAGAAETGGPLSGEHP-LRLLVVDDYAVNRKVIAMMLAPLGCEIVEAD 477

Query: 633 DGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRD 692
           +G +A+  L E   D VL+D +MP+  G++ TR +R  P    K+ +   TA V  D R 
Sbjct: 478 NGQRALDLLAEREVDAVLLDFNMPVMGGLETTRRLRADP-RWRKLPIVCLTAGVMDDERA 536

Query: 693 KMLSAGADDIIAKPIAEHELDMALEQHSER 722
              +AG D  I KPI    L   L + + R
Sbjct: 537 AAATAGMDGFIEKPIEMSTLVSTLARVARR 566