Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  239 bits (609), Expect = 1e-66
 Identities = 135/398 (33%), Positives = 228/398 (57%), Gaps = 9/398 (2%)

Query: 318  IIDIRYKSQDEIRHLIDTFNQKTIYLE--AEKVKAQASTKAKSAFLATLSHEIRTPMNGV 375
            + D + + +  +  ++D    K +  E    K +A A++KAK  FLA +SHEIRTPMN +
Sbjct: 999  LFDSQKQFESAVVSMVDMTELKLLSDELLVAKEEADAASKAKGDFLANMSHEIRTPMNAI 1058

Query: 376  LGTAQILLKDELTSKQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSI 435
            +G +Q+ L+  L  KQ+ ++  +  + + ++S++N+ILD+SKIE GK +++   F L ++
Sbjct: 1059 IGMSQLCLQTALDKKQKNYVEKIERASKSLLSIINDILDFSKIEAGKLDIESVPFQLDTM 1118

Query: 436  IGSIKSIYSSLCVEKGLKFQLNSEITDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAI 495
            +  +  ++S     K L+          R  +GD  RL Q++ NL++NA+KFTE G V +
Sbjct: 1119 LEDLSDMFSEKAAHKQLELLFAVAPNVPRHLFGDSLRLGQVLINLMNNAIKFTERGEVLL 1178

Query: 496  GLS-EESCDEENYLIIKVQDTGIGIAQESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQ 554
             L+  E  +++  L   V+D+GIG+  +   ++F+ F QA++ TTR++GGTGLGLAI KQ
Sbjct: 1179 SLNLVEQQNDDVVLRFSVRDSGIGLTADQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQ 1238

Query: 555  IAELMNGTVLVQSEVGQGSCFKVRVKLAITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNI 614
            + ELM GT+ V+S+ G GS F   VKL I    +   K T A+   G+ +L+ +DN T  
Sbjct: 1239 LVELMGGTIGVESQFGHGSTFYFTVKLQI----SSGQKLTVAQELEGMPILVADDNATAR 1294

Query: 615  MILEAFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQ 674
             I+   + + GF   +V  G +A+T   +  + + L+D  MP  DGI+  ++I+Q     
Sbjct: 1295 DIMRTTLESMGFRVDTVRSGEEAVTRCIQQEYAVALIDWKMPNLDGIETAKQIKQQAKKA 1354

Query: 675  AKILLFGCTADVFKDTRDKMLSAGADDIIAKPIAEHEL 712
             +IL+    A+  +D   ++   G    I+KPI+   L
Sbjct: 1355 PRILMVSAHAN--QDFLSQIEELGLAGYISKPISASRL 1390



 Score = 76.6 bits (187), Expect = 1e-17
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 588  TEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSFD 647
            +E + P       G R+L+VEDN  N+ +   F+   G       +G  A+  L++ SFD
Sbjct: 1410 SESIDPKLLLPLKGKRILLVEDNEMNLEVATEFLEQVGIILSIATNGQIALDKLEQQSFD 1469

Query: 648  LVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRDKMLSAGADDIIAKPI 707
            LVLMD  MP+ DG QAT+ +R+ P    ++ +   TA+     ++  L AG +D IAKPI
Sbjct: 1470 LVLMDCQMPVMDGYQATQALRKRP-ELTELPVVAMTANAMAGDKEMCLRAGMNDHIAKPI 1528



 Score = 36.2 bits (82), Expect = 2e-05
 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 7/67 (10%)

Query: 145 AGGYDRES----WYLAAEREAEGLYFWSPVYVDPYT-RVEMITVSTPYYRNGQFAGVATV 199
           A GYD       W+  A  +  G  +WS  Y D       M+T S P+     + GVATV
Sbjct: 142 AEGYDYTDGSWDWWSKAINQPGG--YWSKAYFDEGAGNTLMVTYSVPFGPENDYFGVATV 199

Query: 200 DLSLESL 206
           DL+L+ L
Sbjct: 200 DLALDKL 206