Pairwise Alignments

Query, 736 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1236 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  221 bits (564), Expect = 1e-61
 Identities = 127/322 (39%), Positives = 192/322 (59%), Gaps = 9/322 (2%)

Query: 343  LEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESG 402
            LEA K  A+ +   KS FLA +SHEIRTPMN ++G  Q+  +  LT++Q+ +L     S 
Sbjct: 709  LEA-KQDAELANLYKSEFLANMSHEIRTPMNAIIGMLQLAQRTSLTAQQKDYLEKAGFSA 767

Query: 403  EHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSEITD 462
            + ++ ++N+ILD+SKIE GK EL+   FPL  ++     + +    E+G++  L + +T 
Sbjct: 768  QSLLRIINDILDFSKIEAGKLELERVPFPLDKVLDHALDLNALKAQEQGVELLLYAPVTA 827

Query: 463  GRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEESCDEENYLIIK--VQDTGIGIA 520
            G    GD  RL Q++ NLLSNAVKFT++G + +G  E+  + ++ + +K  V+DTGIGI+
Sbjct: 828  GLILKGDPLRLGQVLINLLSNAVKFTQSGEIELG-CEDVGERDHRITLKFWVRDTGIGIS 886

Query: 521  QESLGRIFRPFEQAESHTTRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVK 580
            ++   ++F  F QA+  TTR++GGTGLGL+I K +  +M G + VQSE+G GS F   + 
Sbjct: 887  KDQQEKLFDAFAQADGSTTRKYGGTGLGLSISKHLVSMMGGKMQVQSELGVGSTFSFTIS 946

Query: 581  LAITEPVTED--VKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAI 638
              I E    +  V P K      LR L+V+DN T + I  A MR+  FE  +   G +A+
Sbjct: 947  FEIAEEAKVEPLVVPEKLN---NLRTLVVDDNPTALQIYSALMRDFHFEVDTAASGAEAL 1003

Query: 639  TALQESSFDLVLMDNHMPLKDG 660
              L     DL+L+D  MP  DG
Sbjct: 1004 YKLSRDPIDLLLLDWMMPEMDG 1025



 Score = 65.1 bits (157), Expect = 2e-14
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 573  SCFKVRVKLAITEPVTEDVKPTKAKTYPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVM 632
            + F    +L + +P+ E   P +   + GL VL+VEDN  N  +    +++ G+E     
Sbjct: 1086 AAFADEPRLNVVQPIDE--LPVEEGEHTGL-VLLVEDNFINQQVATELLKSAGYEVVVAG 1142

Query: 633  DGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQAKILLFGCTADVFKDTRD 692
            +G  A+  +    FD VLMD  MP+ DG+ A R +R+       + +   TA      R+
Sbjct: 1143 NGQIALDIIDSRPFDAVLMDIQMPVMDGLTAARALRE-RFSADVLPIIAMTAHAMSGDRE 1201

Query: 693  KMLSAGADDIIAKPIAEHEL 712
            K L+AG +  I KPI   EL
Sbjct: 1202 KSLAAGMNAHITKPIVLTEL 1221



 Score = 34.3 bits (77), Expect = 4e-05
 Identities = 15/41 (36%), Positives = 23/41 (56%)

Query: 166 FWSPVYVDPYTRVEMITVSTPYYRNGQFAGVATVDLSLESL 206
           FWS  YVD   +  + T+  P Y + +F G   +D++L SL
Sbjct: 213 FWSEAYVDSTGKGLLTTLGVPVYLDDEFMGSINLDMTLASL 253