Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) from Pseudomonas fluorescens FW300-N2E2

 Score =  238 bits (606), Expect = 7e-67
 Identities = 144/340 (42%), Positives = 203/340 (59%), Gaps = 11/340 (3%)

Query: 169 SPMAQRLARVKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAG 228
           +P       V +HLL G S M+P +VAGG++++LS +  G  A  E G LA  A M I G
Sbjct: 226 APAKSEKTGVYKHLLTGVSFMLPMVVAGGLMIALSFVF-GIEAFKEPGTLA-AALMQIGG 283

Query: 229 LTLFTVV---LGGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQL 285
            T F ++   L GYIAYS+AD+PGLAPGMIG  +A +    GFIG II GF AG+  + +
Sbjct: 284 DTAFKLMVPLLAGYIAYSIADRPGLAPGMIGGMLA-STLGAGFIGGIIAGFLAGYAAKAI 342

Query: 286 KRIA-LPDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVV 344
            R A LP S+ +L  I I PL+ +  T   +++++G P+A  +  L  FL SM  +  ++
Sbjct: 343 SRYARLPQSLEALKPILIIPLLASLFTGLVMIYIVGKPVAGMLEALTHFLDSMGTTNAIL 402

Query: 345 LGAVLGAMTAFDMGGPINKVATLFAQTQVNTQPWL-MGGVGIAICTPPLGMALATLLSPS 403
           LG +LGAM   D+GGPINK A  F+   + +Q +  M     A   PP+G+ +AT ++  
Sbjct: 403 LGVLLGAMMCVDLGGPINKAAYAFSVGLLASQSYAPMAATMAAGMVPPIGLGIATFIARR 462

Query: 404 KFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHA 463
           KF + EREAGKAA ++G+  ISEGAIPFAA DP RV+PA IAGG +   +   F     A
Sbjct: 463 KFAQTEREAGKAALVLGLCFISEGAIPFAAKDPLRVIPASIAGGALTGALSMYFGCKLMA 522

Query: 464 PWGGWIVLPV---VDGKLGYILGTIAGALATALIAIALKK 500
           P GG  V+ +   ++  L Y+L  +AG+L T +    LK+
Sbjct: 523 PHGGLFVMLIPNAINHALLYLLAIVAGSLLTGVAYALLKR 562



 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 43/133 (32%), Positives = 76/133 (57%), Gaps = 8/133 (6%)

Query: 490 ATALIAIALKKTVHEQDNEQGQSLAFSSVIGEGQA-------DILAVTSCPSGVAHTFLA 542
           +T  +A+    +V  +  E+ +    S V+ +  A        ++A+T+CP+GVAHTF+A
Sbjct: 75  STPALALQDVDSVLRRGAEEAEVFLASDVVEQAPAVSTDRAPRLVAITACPTGVAHTFMA 134

Query: 543 AKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVIFAHDVAIKEPERFKHIKVI 602
           A++L++AA   G  ++VETQG+ G  N ++A+ +  A +V+ A D+ +   ERF   K+ 
Sbjct: 135 AEALQQAATKLGYDLQVETQGSVGARNPLSAEAIAEADVVLLATDIEV-ATERFAGKKIY 193

Query: 603 DVTTKDAILNAAA 615
             +T  A+  A A
Sbjct: 194 RCSTGIALKQAEA 206



 Score = 30.8 bits (68), Expect = 2e-04
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 529 VTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVI 583
           VT+CP+G+  + L A+ L+ AA   G    VE   A     +++A  ++ A+ V+
Sbjct: 1   VTACPNGMVTSVLCARLLDAAAQRQGWSTSVEVHDAAHPERQLSAATLEAAEWVL 55