Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component from Pseudomonas stutzeri RCH2

 Score =  243 bits (621), Expect = 1e-68
 Identities = 146/332 (43%), Positives = 205/332 (61%), Gaps = 11/332 (3%)

Query: 178 VKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAGLTLFTVV-- 235
           V +H+L G S+M+P +VAGG+L++LS +  G  A  EEG LA  A M I G T F ++  
Sbjct: 240 VYKHMLTGVSYMLPMVVAGGLLIALSFVF-GIEAFKEEGTLA-AALMKIGGETAFQLMVP 297

Query: 236 -LGGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKR-IALPDS 293
            L GYIAYS+AD+PGLAPGMIG  +A      GFIG II GF AG+  + + R I LP S
Sbjct: 298 LLAGYIAYSIADRPGLAPGMIGGLLA-GTLGAGFIGGIIAGFVAGYAAKAVSRWIPLPAS 356

Query: 294 MSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLGAMT 353
           + SL  I I PL+ + VT   +++++G P+A  +  L +FL +M  S  ++LG +LG M 
Sbjct: 357 IESLKPILIIPLLASLVTGLVMIYIVGTPVAKLLAGLTEFLDTMGTSNAILLGLLLGTMM 416

Query: 354 AFDMGGPINKVATLFAQTQVNTQPWL-MGGVGIAICTPPLGMALATLLSPSKFKRDEREA 412
             D+GGP+NK A  F+   + +Q +  M     A   PP+GM +ATL++  KF + EREA
Sbjct: 417 CVDLGGPVNKAAYAFSVGLLASQSYAPMAATMAAGMVPPIGMGIATLIARRKFAQTEREA 476

Query: 413 GKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVLP 472
           GKAA ++G   ISEGAIPFAA DP RV+PA IAGG +   +   F     AP GG  VL 
Sbjct: 477 GKAALVLGCCFISEGAIPFAAKDPLRVIPASIAGGALTGALSMAFGAKLLAPHGGLFVLL 536

Query: 473 V---VDGKLGYILGTIAGALATALIAIALKKT 501
           +   ++  L Y++  +AG+L T +I   +K++
Sbjct: 537 IPNAINHALLYLVAILAGSLVTGVIYAVIKQS 568



 Score = 62.8 bits (151), Expect = 4e-14
 Identities = 29/69 (42%), Positives = 49/69 (71%)

Query: 522 GQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKL 581
           G+  ++AVT+CP+GVAHTF+AA++L++AA   G  ++VET+G+ G  N + A  +  A +
Sbjct: 116 GKPKLVAVTACPTGVAHTFMAAEALQQAAIRKGYDLQVETRGSVGARNVLEADVIAAADV 175

Query: 582 VIFAHDVAI 590
           V+ A D+ +
Sbjct: 176 VLLAADIEV 184



 Score = 39.7 bits (91), Expect = 4e-07
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 525 DILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVIF 584
           ++L VT+CP+G+  + L ++ LE AA   G    VE      I + +T   +  A LV+ 
Sbjct: 2   NLLIVTACPNGMVTSVLTSRLLEAAAHRLGWSTAVEVHDPKAIGSPLTPAQIANADLVVV 61

Query: 585 AHDVAIKEPERFKHIKVIDVTTKDAILNAAALVQ 618
                +   +RF   +V   T  +A+L+  A ++
Sbjct: 62  VKTGPL-SLQRFVGKRVAQSTPSEALLDPEAFLR 94