Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 580 a.a., PTS system D-fructose-specific IIB component (F1P-forming), Frc family / PTS system D-fructose-specific IIC component (F1P-forming), Frc family from Pseudomonas syringae pv. syringae B728a

 Score =  239 bits (609), Expect = 3e-67
 Identities = 143/339 (42%), Positives = 201/339 (59%), Gaps = 9/339 (2%)

Query: 169 SPMAQRLARVKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQM--GI 226
           SP  Q  A V +HLL G S M+P +VAGG+L++LS +  G  A  E G LA       G 
Sbjct: 231 SPARQEKAGVYKHLLTGVSFMLPMVVAGGLLIALSFVF-GITAFKEPGTLAAALMQIGGE 289

Query: 227 AGLTLFTVVLGGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLK 286
           A   L   +L GYIAYS+AD+PGLAPGMIG  +A +    GFIG I+ GF AG+    + 
Sbjct: 290 AAFKLMVPLLAGYIAYSIADRPGLAPGMIGGLLA-STLGAGFIGGIVAGFLAGYSAAAIN 348

Query: 287 RIA-LPDSMSSLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVL 345
           R A LP S+ +L  I I PL+ +  T   +++++G P+A  +  L  FL SM  +  ++L
Sbjct: 349 RYARLPASVEALKPILIIPLLSSLFTGLVMIYVVGKPVAGMLEALTHFLDSMGTTNAILL 408

Query: 346 GAVLGAMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVGIAI-CTPPLGMALATLLSPSK 404
           G VLGAM   D+GGPINK +  F+   + +Q +      +A    PP+GM +AT+L+  K
Sbjct: 409 GVVLGAMMCVDLGGPINKASYAFSVGLLASQSYAPMATAMAAGMVPPIGMGIATILARRK 468

Query: 405 FKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAP 464
           F + EREAGKAA ++G+  ISEGAIPFAA DP RV+PA + GG +   +   F     AP
Sbjct: 469 FAQSEREAGKAAFVLGLCFISEGAIPFAAKDPLRVIPASVVGGALTGALSMYFGCKLMAP 528

Query: 465 WGGWIVLPV---VDGKLGYILGTIAGALATALIAIALKK 500
            GG  V+ +   ++  L Y+L  IAG++ T +I   +K+
Sbjct: 529 HGGLFVMLIPNAINHALLYLLAIIAGSVLTGVIYALIKR 567



 Score = 67.4 bits (163), Expect = 2e-15
 Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 1/97 (1%)

Query: 522 GQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKL 581
           GQ  I+A+T+CP+GVAHTF+AA+++++AA      ++VETQG+ G  N ++AK +  A +
Sbjct: 119 GQPRIVAITACPTGVAHTFMAAEAIQQAAKRLNYDLQVETQGSVGARNPLSAKAIADADV 178

Query: 582 VIFAHDVAIKEPERFKHIKVIDVTTKDAILNAAALVQ 618
           V+ A D+ +   +RF   K+    T  A+  + A ++
Sbjct: 179 VLLAADIEV-NTDRFAGKKIYRCGTGIALKQSEATLK 214



 Score = 40.0 bits (92), Expect = 3e-07
 Identities = 21/55 (38%), Positives = 33/55 (60%)

Query: 529 VTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVI 583
           VT+CPSG   + L+A+ LE AA   G +  VE    N    +++A+D++ A LV+
Sbjct: 6   VTACPSGKVSSVLSARLLEAAALRQGWETSVEIIDPNKADQQLSAEDIEAADLVL 60