Pairwise Alignments

Query, 621 a.a., PTS fructose transporter subunit IIA from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., PTS system, fructose-specific IIBC component from Marinobacter adhaerens HP15

 Score =  225 bits (573), Expect = 5e-63
 Identities = 138/334 (41%), Positives = 200/334 (59%), Gaps = 18/334 (5%)

Query: 180 EHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAGLTLFTVV---L 236
           +HLL G S M+P +VAGG+L++LS +  G  A  EEG LA  A M I G T F ++   L
Sbjct: 250 KHLLTGVSFMLPMVVAGGLLIALSFVF-GIEAFQEEGTLA-AALMQIGGGTAFKLMIPLL 307

Query: 237 GGYIAYSMADKPGLAPGMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQL-KRIALPDSMS 295
            GYIA+S+AD+PGLAPGMIG ++A  +   GF+G I+ GF AG+V R + +++ +P+S+ 
Sbjct: 308 AGYIAWSIADRPGLAPGMIGGFLA-GELGAGFLGGIVAGFLAGYVARFISQKLPMPESIE 366

Query: 296 SLGSIFIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLGAMTAF 355
           SL  I I PL+ + VT   ++++IG P+A+ M  L  FL  M  +  ++LG +LGAM  F
Sbjct: 367 SLKPILIIPLLASLVTGLGMIYVIGEPMAAIMGALTGFLEGMGTTNAILLGGILGAMMCF 426

Query: 356 DMGGPINKVATLF-----AQTQVNTQPWLMGGVGIAICTPPLGMALATLLSPSKFKRDER 410
           D+GGP+NK A  F     ++    + P  M  +  A   P +GM +A+ ++  KF   ER
Sbjct: 427 DLGGPVNKAAYTFGVGLLSEGSGGSAP--MAAIMAAGMVPAIGMGVASFIARRKFAEAER 484

Query: 411 EAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIV 470
           +AG+A+ ++G+  ISEGAIPF A DP RV+P  + GG +   +  LF V   AP GG  V
Sbjct: 485 QAGRASFVLGLCFISEGAIPFMAKDPLRVIPVCMIGGAITGALSMLFTVKLMAPHGGLFV 544

Query: 471 LPV---VDGKLGYILGTIAGALATALIAIALKKT 501
           L +   V   L Y++    G+L       AL KT
Sbjct: 545 LAIPNAVSAVLPYLIAIAVGSLVIG-FGYALLKT 577



 Score = 76.3 bits (186), Expect = 4e-18
 Identities = 45/110 (40%), Positives = 71/110 (64%), Gaps = 3/110 (2%)

Query: 511 QSLAFSSVIGEGQAD--ILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANGII 568
           +S+A S+ +G   A   I+AVT+CP+GVAHTF+AA++L  AA  AG KI+VETQG+ G  
Sbjct: 112 ESIATSTAVGSTSAGKRIVAVTACPTGVAHTFMAAEALTAAAQSAGHKIRVETQGSVGAQ 171

Query: 569 NRITAKDVQRAKLVIFAHDVAIKEPERFKHIKVIDVTTKDAILNAAALVQ 618
           + +T +++  A +VI A D+ + +P RF   +V   +T  A+   A  ++
Sbjct: 172 DPLTEEEIAAADVVILACDIEV-DPGRFSGKRVWRTSTGAALKKPADTIR 220



 Score = 48.9 bits (115), Expect = 6e-10
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 6/96 (6%)

Query: 525 DILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVETQGANG-IINRITAKDVQRAKLVI 583
           +++ VT+CP GVA  FLAA++LE+AA   G  +  +T+G +G   N+ +   +Q+A LVI
Sbjct: 2   NLIIVTACPQGVATRFLAARALERAANRRGWSVTTDTRGPDGKTDNKPSEAAIQQADLVI 61

Query: 584 FAHDVAIK-EPERFKHIKVIDVTT----KDAILNAA 614
            A  + +  +    K +  I VT      DAIL  A
Sbjct: 62  AAVGIPVNLDVYAGKRLLQIPVTAALPDPDAILTRA 97