Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component from Pseudomonas stutzeri RCH2

 Score =  222 bits (566), Expect = 2e-62
 Identities = 129/338 (38%), Positives = 198/338 (58%), Gaps = 6/338 (1%)

Query: 6   AQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGLLADI 65
           A AT+ S   K   + +  H+L G S+MLP +VAGG+L+AL+ +   +       L A +
Sbjct: 224 AVATSASGEKKGEKTGVYKHMLTGVSYMLPMVVAGGLLIALSFVFGIEAFKEEGTLAAAL 283

Query: 66  SNIGIK-GLVLFPIILGGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFIAGGV 124
             IG +    L   +L G+I YSIAD+P LAP MI   +   +G GF+G I+AGF+AG  
Sbjct: 284 MKIGGETAFQLMVPLLAGYIAYSIADRPGLAPGMIGGLLAGTLGAGFIGGIIAGFVAGYA 343

Query: 125 VFQLKK-IPLSANMTALGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLASMAGA 183
              + + IPL A++ +L    I PL+ +L++  ++++ +G P+   +A + EFL +M  +
Sbjct: 344 AKAVSRWIPLPASIESLKPILIIPLLASLVTGLVMIYIVGTPVAKLLAGLTEFLDTMGTS 403

Query: 184 SKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPWL-MGGVGIAICTPPLGMALATF 242
           + ++LG +LG M   D+GGP+NK A  F+   + +Q +  M     A   PP+GM +AT 
Sbjct: 404 NAILLGLLLGTMMCVDLGGPVNKAAYAFSVGLLASQSYAPMAATMAAGMVPPIGMGIATL 463

Query: 243 LFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLTNV 302
           + ++KF + E+EAGKAA ++G   ISEGAIPFAA DP+RV+P+ +AGG +          
Sbjct: 464 IARRKFAQTEREAGKAALVLGCCFISEGAIPFAAKDPLRVIPASIAGGALTGALSMAFGA 523

Query: 303 LLHAPWGGLITAPVSSNIP---MYVVGIALGSLTTALI 337
            L AP GGL    + + I    +Y+V I  GSL T +I
Sbjct: 524 KLLAPHGGLFVLLIPNAINHALLYLVAILAGSLVTGVI 561



 Score = 85.5 bits (210), Expect = 4e-21
 Identities = 64/179 (35%), Positives = 93/179 (51%), Gaps = 19/179 (10%)

Query: 297 GFLTNVLLHAPW--GGLITAPVSSNIPMYVVGIALGSLTTALIVGFWKPVAEEEVEDEIA 354
           G+ T V +H P   G  +T    +N  + VV +  G L+    VG  K VA+    + + 
Sbjct: 31  GWSTAVEVHDPKAIGSPLTPAQIANADLVVV-VKTGPLSLQRFVG--KRVAQSTPSEALL 87

Query: 355 EAAPTQAQAAPAAGE-------------GEYDIVAVTCCPSGVAHTFMAAKALEKAGAAA 401
           +       AA  A E             G+  +VAVT CP+GVAHTFMAA+AL++A    
Sbjct: 88  DPEAFLRSAADTASELQQADEAEAAHTSGKPKLVAVTACPTGVAHTFMAAEALQQAAIRK 147

Query: 402 GSKIKVETQGQNGIKNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKK 460
           G  ++VET+G  G +N +    +A A +V+LA DI+V D  RFA  +V  C T  A+K+
Sbjct: 148 GYDLQVETRGSVGARNVLEADVIAAADVVLLAADIEV-DVARFAGKRVFRCGTGVALKQ 205



 Score = 41.6 bits (96), Expect = 7e-08
 Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 1/86 (1%)

Query: 373 DIVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGIKNRITDLDVANAKLVIL 432
           +++ VT CP+G+  + + ++ LE A    G    VE      I + +T   +ANA LV++
Sbjct: 2   NLLIVTACPNGMVTSVLTSRLLEAAAHRLGWSTAVEVHDPKAIGSPLTPAQIANADLVVV 61

Query: 433 AHDIQVKDAHRFANAKVIECSTKEAM 458
                +    RF   +V + +  EA+
Sbjct: 62  VKTGPL-SLQRFVGKRVAQSTPSEAL 86