Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 580 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  224 bits (570), Expect = 8e-63
 Identities = 133/332 (40%), Positives = 196/332 (59%), Gaps = 10/332 (3%)

Query: 25  HLLFGTSHMLPFIVAGGVLLALAVMASG--KGAVPADGLLA-DISNIGIK-GLVLFPIIL 80
           HL+ G S MLPF+ AGG+L+ALA    G   G     G LA  +  IG K G  L    L
Sbjct: 246 HLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTLMVPAL 305

Query: 81  GGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFIAG-GVVFQLKKIPLSANMTA 139
            G+I YSIAD+P +AP MI   + A++  GFLG I+AGFIAG GV    + I L  N+  
Sbjct: 306 AGYIAYSIADRPGIAPGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYIKLPRNLEG 365

Query: 140 LGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLASMAGASKVVLGAILGGMTAFD 199
           L    I P++GTL+    +++  G+P+   +A +  +L  M G+S ++LG +LGGM AFD
Sbjct: 366 LKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLTAWLRGMQGSSALLLGLLLGGMMAFD 425

Query: 200 MGGPINKVATLFAQTQVDTQPWL-MGGVGIAICTPPLGMALATFLFKKKFTKQEQEAGKA 258
           MGGP+NK A  F+   + +Q +  M    +A  TPPLG+ALAT++F+ +FT +E+ +  A
Sbjct: 426 MGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTVEERGSATA 485

Query: 259 AAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLTNVLLHAPWGG---LITAP 315
           A ++G   ++EGAIP+AA DP+R +P++V G  V           L AP GG   L+   
Sbjct: 486 AGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFVLLIPN 545

Query: 316 VSSNIPMYVVGIALGSLTTALIVGFW-KPVAE 346
             +++  YV+ + +G + TA+ +    KPVA+
Sbjct: 546 AVTHLLNYVLALVVGVVVTAVALRLLKKPVAD 577



 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 60/178 (33%), Positives = 92/178 (51%), Gaps = 11/178 (6%)

Query: 290 GIVGCVFGFLTNVLLHAPWGGLITAPVSSNIPMYVVGIALGSLTTALIVGFWKPVAEEEV 349
           G++G +   LTN   H    G   A  +      ++ ++LG++          P A   V
Sbjct: 44  GVLGALPTELTNGAAHVLIVGDADADTARFGDAQLLHLSLGAVLD-------DPAAA--V 94

Query: 350 EDEIAEAAPTQAQAAP-AAGEGEYDIVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVE 408
               A  AP    A   A+G G   IVA+T CP+G+AHTFMAA+ L++A    G +++VE
Sbjct: 95  SQLAATTAPASTSATTDASGAGGKRIVAITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVE 154

Query: 409 TQGQNGIKNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKAAELIQ 466
           TQG  G ++ +TD ++  A +VI+A D +V D  RF   ++ +  TK A+     LIQ
Sbjct: 155 TQGSVGAQDALTDEEIRAADVVIIAADREV-DLARFGGKRLFKSGTKPAINDGPALIQ 211