Pairwise Alignments

Query, 467 a.a., PTS fructose transporter subunit IIC from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., PTS fructose IIC component (NCBI) from Rhodospirillum rubrum S1H

 Score =  235 bits (599), Expect = 3e-66
 Identities = 137/331 (41%), Positives = 200/331 (60%), Gaps = 10/331 (3%)

Query: 25  HLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPA--DGLLA-DISNIGIKG-LVLFPIIL 80
           HL+ G S MLPF+VAGG+L+ALA    G  A      G LA D+  IG K   VL    L
Sbjct: 243 HLMTGVSFMLPFVVAGGLLIALAFALGGINAFDEANKGTLAYDLFQIGAKSAFVLMVPAL 302

Query: 81  GGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFIAGGVVFQLKK-IPLSANMTA 139
            G+I +SIAD+P +AP MI   + A++G GFLG I+AGFIAG V     + I L  N+  
Sbjct: 303 AGYIAFSIADRPGIAPGMIGGLVAANLGAGFLGGIIAGFIAGYVTAWFNRTIRLHRNLEG 362

Query: 140 LGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLASMAGASKVVLGAILGGMTAFD 199
           L    I P++GT+++  ++++ +G P+   ++ + E L  M G+S +VLG ++G M AFD
Sbjct: 363 LKPVLILPVLGTVVTGLLMIYVVGTPVAGLLSWLTEALRGMQGSSAIVLGLLIGAMMAFD 422

Query: 200 MGGPINKVATLFAQTQVDTQPWL-MGGVGIAICTPPLGMALATFLFKKKFTKQEQEAGKA 258
           MGGP+NK A  F+   + ++ +  M    +A  TP LG+ALA+ LF+ +FT  E+EAG A
Sbjct: 423 MGGPVNKAAYAFSTGLLASEVYTPMAAAMVAGMTPALGVALASRLFRSRFTASEREAGGA 482

Query: 259 AAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLTNVLLHAPWGGLITAPVSS 318
           AA++G   I+EGAIPFAA+DP RV+P+++AG              L  P GG+   P+ +
Sbjct: 483 AAVLGLAFITEGAIPFAASDPFRVIPALMAGSAAAGAISMTVGAELKVPHGGIFVLPIPN 542

Query: 319 NIPM---YVVGIALGSLTTALIVGFWK-PVA 345
            +     Y+V + +G+L TAL++   K PVA
Sbjct: 543 AVTHLLGYIVALVVGTLITALVLRITKRPVA 573



 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 11/150 (7%)

Query: 324 VVGIALGSLTTALIVGFWKPVAEEEVEDEIAEAAPT--QAQAAPAAG------EGEYDIV 375
           V+ I  G L      G   P  E  +E  +A+      +A+ A  AG      +G   IV
Sbjct: 60  VILIGTGDLDVGRFPGL--PKLETTIEAVLADVGAVLGRAEGAELAGSVAATDDGVRRIV 117

Query: 376 AVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGIKNRITDLDVANAKLVILAHD 435
           A+T CP+G+AHTFMAA+ + +A  A G + +VETQG  G ++ ++D ++A A +V++A D
Sbjct: 118 AITSCPTGIAHTFMAAEGITQAAKALGYQARVETQGSVGSRDTLSDDEIAQADIVLIAAD 177

Query: 436 IQVKDAHRFANAKVIECSTKEAMKKAAELI 465
            Q+ D  RF   +V    TK A+     LI
Sbjct: 178 TQI-DLARFDGKRVFLSGTKPAIADGKALI 206