Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., acetoin catabolism regulatory protein from Sinorhizobium meliloti 1021

 Score =  273 bits (698), Expect = 2e-77
 Identities = 197/609 (32%), Positives = 308/609 (50%), Gaps = 56/609 (9%)

Query: 13  LVNSWQRS-EQAGLTQQSRAQDIRLSDNKLKERRQELAGLIDTVSRFALPLFYQLFAHSD 71
           +V SW R  E   L      +   + + +L+E RQ+   LI  ++R  L   ++  A  +
Sbjct: 26  VVKSWLRCLEHHRLDPAQSCEAYIVPETRLREHRQQSEDLI-AIARSGLENLFRQVAGQN 84

Query: 72  SRLILTDQHGVIIGSWGQARFREKLSQIALSSGACWQEPIKGTNAIGTALIEQKPISVIG 131
             L+L+D+ GV +   G   F   L +  L  G+ W E   GT A+G  L   + +++  
Sbjct: 85  YVLLLSDREGVTVEFLGDPLFGNSLRKAGLYLGSEWSEWRAGTCAVGACLETGEALTIHQ 144

Query: 132 EQHFIQHHHFISCSASPIFDYTGQLIGVLDITSEQQKHTLSTQVVVQNMVQLVEN--QLL 189
             HF   H  +SC+A+PI+D  G+L  VLDI+        ++Q +  ++V       +L 
Sbjct: 145 TDHFDNTHTPLSCTAAPIYDIQGELSAVLDISLLSSPILKASQNLALHLVSATVRRIELA 204

Query: 190 NQIPHGHVR--IDLACEPSLLSSGWQGVIIADESGQILAHNQVAGQLLAQG--------- 238
           N +     +  +  +  P  L    +  I  D  G+I        ++LA+          
Sbjct: 205 NLMAQARNQWVLRFSRSPEFLDVDPEAAISIDGLGRIAGMTHAGAKILARSTGLDWRDPQ 264

Query: 239 RVIGQSV---------------------EQVLPRPQTHASFIYTTTPLHSKQHRT----R 273
           ++IG+ V                     E+++     +A F +   P HSK         
Sbjct: 265 QLIGEPVSRFFDIEVDNLSDLTRRRPTRERLVFARDGNALFAHAIEP-HSKVRAPLVSRE 323

Query: 274 ALTPASDLHFGDAEVERCWQ-QANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGP 332
            + PA     GDA V    Q +A ++    + +LI G+TG GK    +A+H+ S  + GP
Sbjct: 324 QIPPALRRLGGDAPVIAALQAKAAKLARTRLPILIQGETGTGKEHLARAIHEGSGLE-GP 382

Query: 333 LVAVNCGALAKELVEAELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQS 392
            VA+NC A+ ++L+E+ELFGY+ GAFTGAS KG +G +  AD G LFLDEI D+PL  QS
Sbjct: 383 FVAINCAAIPEQLIESELFGYLPGAFTGASAKGRKGLIEQADGGTLFLDEIGDMPLALQS 442

Query: 393 RLLHVLQDKTVLPVGSNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPS 452
           RLL VL +  VLPVG     KV I+I++A+H+ L+ LV+QG FR+DLYYRL+   + LP+
Sbjct: 443 RLLRVLAEGEVLPVGGTAPRKVRIRIVSASHRPLQTLVSQGAFREDLYYRLNAATLTLPA 502

Query: 453 FQQRQDRQALIHHIHRRYSDAGQQICGDLMQRLLAYHWPGNLRELDSLIKVASLMAEGEG 512
            + R D   ++  + +R+ D    +    +  L A+ WPGN+RELD++I VA+ +AE  G
Sbjct: 503 LRDRPDFDWVLEQLLKRHGDGELILSPAALSALKAHDWPGNIRELDNVIGVAAALAE-NG 561

Query: 513 VLTFNHLPTHLAQKLSHAAPTATEDDQQKDIKSTVEASLLKTYQATQGNISQTSRLLGLS 572
           V+    LP  L   L++A      +           A+L  T  A   NIS+ +R LGL 
Sbjct: 562 VVELGDLPDQL---LANADTVGGNE---------ASATLSLTLTACNWNISEAARRLGLD 609

Query: 573 RNTIYRKLK 581
           R+T++R++K
Sbjct: 610 RSTVHRQIK 618