Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) from Rhodospirillum rubrum S1H

 Score =  190 bits (483), Expect = 1e-52
 Identities = 122/332 (36%), Positives = 192/332 (57%), Gaps = 38/332 (11%)

Query: 288 VERCWQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVE 347
           ++  ++   R+++ D+ ++I G++G GK    +ALH   +R+NG  VAVN GA+ +EL+E
Sbjct: 146 MQEIYRTLARLMNTDLTVMINGESGTGKELVARALHDYGKRRNGSFVAVNMGAIPRELIE 205

Query: 348 AELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVG 407
           +ELFG+  GAFTGA H    G+   AD G LFLDEI D+PL+AQ+RLL VLQ+     VG
Sbjct: 206 SELFGHEKGAFTGA-HARSAGRFEQADGGTLFLDEIGDMPLEAQTRLLRVLQESEYTTVG 264

Query: 408 SNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQR-QDRQALIHH- 465
                + +++IIAATH++L QL+ QGLFR+DL+YRL+ + + LP  ++R +D   L  H 
Sbjct: 265 GRQTLRANVRIIAATHRDLRQLIHQGLFREDLFYRLNVVPLRLPPLRERVEDIPELTRHF 324

Query: 466 IHRRYSDAG---QQICGDLMQRLLAYHWPGNLRELDSLIK-VASLMAE------------ 509
           +H      G   + +    M+RL  + W GN+REL++L++ +A+L ++            
Sbjct: 325 LHAVAEHDGLPPKVLEAPAMERLKKHRWSGNVRELENLVRRLAALYSQEVIGVEVIEAEL 384

Query: 510 --------GEGVLTFNHLPTHLAQKLSH-------AAPTATEDDQQKDIKSTVEASLLKT 554
                    EG  +   L T + + L H       A P A   ++   I   VE  L+  
Sbjct: 385 SSSAPPILDEGDESAEGLSTKVERHLRHYFEAHGEALPPAGLHER---ISREVERPLISL 441

Query: 555 -YQATQGNISQTSRLLGLSRNTIYRKLKALGI 585
             +AT+GN  + ++LLGL+RNT+ +K++ L I
Sbjct: 442 CLEATRGNQIKAAQLLGLNRNTLRKKIRDLDI 473