Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., sigma-54-dependent Fis family transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score =  186 bits (473), Expect = 2e-51
 Identities = 106/286 (37%), Positives = 172/286 (60%), Gaps = 9/286 (3%)

Query: 305 LLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVEAELFGYVAGAFTGASHK 364
           +LILG++GVGK     A+H NS   +GP V  NC AL + +VE+ELFG+  G+FTGA   
Sbjct: 243 VLILGESGVGKELVANAMHYNSGNADGPFVKFNCAALPENIVESELFGHEKGSFTGAVGM 302

Query: 365 GYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVGSNHATKVDIQIIAATHK 424
             +G+  LAD G +FLDE+ +L L  Q++LL V+Q++T   VG N   KVD++IIAAT++
Sbjct: 303 R-KGRFELADGGTIFLDEVGELSLPMQAKLLRVIQERTFERVGGNKPVKVDLRIIAATNR 361

Query: 425 NLEQLVTQGLFRQDLYYRLSDLVVELPSFQQRQDRQALI--HHIHRRYSDAG---QQICG 479
           NL  +V +G FR+DLYYRL+   + +P  + R     L+  H + R  + AG   ++I  
Sbjct: 362 NLLDMVAKGTFREDLYYRLNVFPITIPPLRDRGSDVVLLADHFVARSAAAAGKDVKRIST 421

Query: 480 DLMQRLLAYHWPGNLRELDSLIKVASLMAEGEGVLTFNHLPTHLAQKLSHAAPTATEDDQ 539
             +  L+AYHWPGN+REL+++I+  S++   +GV+   +LP  L  + S    T      
Sbjct: 422 PALNMLMAYHWPGNVRELENVIE-RSVILSDDGVIHGYNLPPSL--QTSEETGTNFGCSM 478

Query: 540 QKDIKSTVEASLLKTYQATQGNISQTSRLLGLSRNTIYRKLKALGI 585
           +  +++     +++  +   GN ++ ++ LGL+R  +  +++  GI
Sbjct: 479 EAKVEAVEYEMIVEALKTHNGNTTEAAKELGLTRRVLGLRIEKYGI 524