Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., transcriptional activator of acetoin/glycerol metabolism from Dechlorosoma suillum PS

 Score =  354 bits (909), Expect = e-102
 Identities = 223/610 (36%), Positives = 336/610 (55%), Gaps = 45/610 (7%)

Query: 13  LVNSWQRSEQAGLTQQSRAQDI-RLSDNKLK---ERRQELAGLIDTVSRFALPLFYQLFA 68
           L+ SW RS  AGL    R  +  RLS+  L+   ER QE     + V  +   L+ Q+ A
Sbjct: 35  LLRSWHRSRGAGLEPVGRNPETPRLSEQHLRQALERHQEFVAHAEPVMEY---LYAQVQA 91

Query: 69  HSDSRLILTDQHGVIIGSWGQARFREKLSQIALSSGACWQEPIKGTNAIGTALIEQKPIS 128
            S S ++L D  G+++ + G   F  K  ++AL+ GA W E  +GTNAIGTAL E   + 
Sbjct: 92  -SHSMVVLADNRGLLVHALGDPDFLGKAERVALAPGASWHEQHRGTNAIGTALAEGAAVE 150

Query: 129 VIGEQHFIQHHHFISCSASPIFDYTGQLIGVLDITSEQQKHTLSTQVVVQNMVQLVENQL 188
           + G +HF++ + F++C+A+PI D +G+L+G LDI+ + + H   TQ +V+   Q++EN+L
Sbjct: 151 IHGAEHFLERNTFLTCAAAPILDPSGKLLGALDISGDHRSHHPHTQGLVRTAAQMIENRL 210

Query: 189 LNQIPHGHVRIDLACEPSLLSSGWQGVIIADESGQILAHNQVAGQLLAQG---------- 238
           L      H+R+ L      + +  +GV+   E G I+  N+ A  +L             
Sbjct: 211 LLSRHRRHIRLHLHPRAEGIGTVAEGVLALSEDGWIVGANRAALAMLGLQPADLGATPLE 270

Query: 239 RVIGQSVEQVLP--RPQTHASFIYTTT-------PLHSKQH-----RTRALTPASD---- 280
           RV+    E +L   R Q   + +  T         +H+ +         A TP  D    
Sbjct: 271 RVLDSRSEDLLDWGRRQGQQALLVNTRRGGRLFLQIHAGKAPIPVGTAAASTPPQDALAA 330

Query: 281 LHFGDAEVERCWQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGA 340
           L  GDA ++    +A +V  K I LL+ G++GVGK    +A+H++S R+ GP VAVNC A
Sbjct: 331 LDTGDARLKAALDKARKVAGKPIPLLLHGESGVGKELLAQAIHRSSPRREGPFVAVNCAA 390

Query: 341 LAKELVEAELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQD 400
           L + L+EAELFGY  GAF+GA  +G  G++R A  G LFLDEI D+PL+ QSRLL VLQ+
Sbjct: 391 LPENLIEAELFGYAPGAFSGARKEGSPGRLREAHGGTLFLDEIGDMPLNLQSRLLRVLQE 450

Query: 401 KTVLPVGSNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQRQDRQ 460
           + V P+GS     VD  ++ ATH+ L Q V  G FR DLYYRL+ L + LP+ ++R D  
Sbjct: 451 RQVTPLGSGKPVAVDFALVCATHRPLRQEVEAGRFRADLYYRLNGLTLTLPALRERSDFS 510

Query: 461 ALIHHIHRRYSDAGQQICGDLMQRLLA-YHWPGNLRELDSLIKVASLMAEG-EGVLTFNH 518
           AL+  +    +          + R  A Y WPGNLR+L + ++ A+ + E  E  + + H
Sbjct: 511 ALVARLLAEMAPGRSLALAPAVARAFADYAWPGNLRQLANALRTATALLEADEECIDWPH 570

Query: 519 LPTHLAQKL------SHAAPTATEDDQQKDIKSTVEASLLKTYQATQGNISQTSRLLGLS 572
           LP  LA++L      + AA T  E    + ++     ++ +   A +GN+S+ +R LG+S
Sbjct: 571 LPDDLAEELQQRPLAADAAATMAEPAPDR-LQEVSRLAIQRAVAAARGNLSEAARRLGIS 629

Query: 573 RNTIYRKLKA 582
           RNT+YRKLKA
Sbjct: 630 RNTLYRKLKA 639