Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., ATPase AAA from Klebsiella michiganensis M5al

 Score =  269 bits (687), Expect = 3e-76
 Identities = 185/588 (31%), Positives = 297/588 (50%), Gaps = 30/588 (5%)

Query: 13  LVNSWQRSEQAGLTQQSRAQDI-RLSDNKLKERRQELAGLIDTVSRFALPLFYQLFAHSD 71
           L +SW RS++ GL   +   D  RL  ++L ER    + L  T+++  +    +      
Sbjct: 18  LSDSWCRSQRYGLDPAT--DDFPRLHASELAERLASHSRL-QTLAQPVVNALSRKVNDLQ 74

Query: 72  SRLILTDQHGVIIGSWGQARFREKLSQIALSSGACWQEPIKGTNAIGTALIEQKPISVIG 131
           S ++L+D  G+++ ++G     +K  + AL+ G  W E  +GTNAIGTAL       + G
Sbjct: 75  SVVVLSDASGLVLQTFGDTHAMQKAQRFALAPGNLWSESGRGTNAIGTALAIDDSCEIDG 134

Query: 132 EQHFIQHHHFISCSASPIFDYTGQLIGVLDITSEQQKHTLSTQVVVQNMVQLVENQLLNQ 191
            QHF+  +  + C+A P+    G + GVLDI+         T   V+   + +E     Q
Sbjct: 135 RQHFLTSNRGLYCAAVPLQSPDGNIAGVLDISGPAHYPHARTLSWVKGAAKQIEYLWFKQ 194

Query: 192 IPHGHVRI-DLACEPSLLSSGWQGVIIADESGQILAHNQVAGQLLAQGRVIGQ-SVEQVL 249
             H    +  L  +P  L    + +++  ++    A+     +        G  + +Q+ 
Sbjct: 195 SLHPQQWLMSLHPQPEKLDGVDELLLVFTDAVLTAANRLAMREFSLNAEQFGHLTFQQLF 254

Query: 250 PRPQTHASFIYTTTPLHSKQHRTRALTPAS-----------DLHFGDAEVERCWQQANRV 298
           PR +  A  I        + +  R   PA+           DL F     +R  ++  R+
Sbjct: 255 PRLRQTAVSIPLPLAAGDRHYYYRLRAPATASVAVTPRPGIDLLFSS---QREGEKLLRL 311

Query: 299 IDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVEAELFGYVAGAF 358
           ++  I L I G+TG GK    + LH++S+   G  VA+NC A+ + L+E+ELFGY  GAF
Sbjct: 312 LNAGIGLCIEGETGCGKEYVSRTLHRHSRWSGGKFVAINCAAIPESLIESELFGYQPGAF 371

Query: 359 TGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVGSNHATKVDIQI 418
           TGA+  GY GK+R AD G+LFLDEI D+PL  Q+RLL +LQ+K V P+G++ ++ V+  +
Sbjct: 372 TGANKNGYIGKIREADGGVLFLDEIGDMPLTLQTRLLRILQEKEVTPLGASRSSPVNFAV 431

Query: 419 IAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQRQDRQALIHHIHRRYSDAGQQIC 478
           I ATH+NL Q V +G FR+DL YRL +  + LP  ++  +  A I  + R      +++ 
Sbjct: 432 ICATHRNLAQRVAEGTFREDLLYRLREFALTLPPLREWPELPAFIQRLWRDLGGEKRRVA 491

Query: 479 --GDLMQRLLAYHWPGNLRELDSLIKVASLMAEGEGVLTFNHLPTHLAQKLSHAAPTATE 536
               L+Q L    WPGN+R+L SL++V   +AE    L    LP    +  S  AP    
Sbjct: 492 LGPALVQHLATQPWPGNVRQLQSLMRVLLALAEEGETLAVGDLP---QEYRSSPAPRPPR 548

Query: 537 DDQQKDIKSTVEASLLKTYQATQGNISQTSRLLGLSRNTIYRKLKALG 584
             QQ D +   +     T  +  GNIS+ ++ LG++R+T+YR+    G
Sbjct: 549 GLQQHDAQLIAD-----TLASYNGNISKAAQALGVARSTLYRRAARRG 591