Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., two-component system response regulator GlrR from Klebsiella michiganensis M5al

 Score =  192 bits (488), Expect = 2e-53
 Identities = 111/298 (37%), Positives = 179/298 (60%), Gaps = 13/298 (4%)

Query: 288 VERCWQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVE 347
           +ER  +QA  V   D+ +LI GQ+G GK    +A+H  S R++ P VA+NCGAL ++L+E
Sbjct: 144 MERLLEQAGMVAQSDVSVLINGQSGTGKEIIAQAIHNASPRRDKPFVAINCGALPEQLLE 203

Query: 348 AELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVG 407
           +ELFG+  GAFTGA     +G  + A+ G LFLDEI D+P+  Q +LL VLQ++ V P+G
Sbjct: 204 SELFGHARGAFTGAV-SNREGLFQAAEGGTLFLDEIGDMPVALQVKLLRVLQERKVRPLG 262

Query: 408 SNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQR-QDRQALIHHI 466
           SN    +D++II+ATH++L + + +G FR+DL+YRL+ + +++P   +R +D   L +H+
Sbjct: 263 SNRDIDIDVRIISATHRDLPKAMARGEFREDLFYRLNVVNLKIPPLAERTEDIPLLANHL 322

Query: 467 HRRYSDAG----QQICGDLMQRLLAYHWPGNLRELDSLIKVASLMAEGEGVLTFNHLPTH 522
            R+ +D      +    D M+RL+A  WPGN+R+L ++I+    +A     +  + L   
Sbjct: 323 LRQSADRHKPFVRAFSTDAMKRLMAAKWPGNVRQLVNVIE--QCVALTSSPVISDALVEQ 380

Query: 523 LAQKLSHAAPTATEDDQQKDIKSTVEASLLKTYQATQGNISQTSRLLGLSRNTIYRKL 580
             +  + A PT  E   Q ++       L K  Q T+GN++  +R+ G +R   Y+ L
Sbjct: 381 ALEGENTALPTFVEARNQFELN-----YLRKLLQITKGNVTHAARMAGRNRTEFYKLL 433