Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., Fis family transcriptional regulator from Klebsiella michiganensis M5al

 Score =  200 bits (508), Expect = 2e-55
 Identities = 113/300 (37%), Positives = 183/300 (61%), Gaps = 15/300 (5%)

Query: 296 NRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVEAELFGYVA 355
           +RV      ++I G++G GK    +A+HK S R   P +A+NC A+ ++L+E+ELFGYV 
Sbjct: 287 SRVAPSPSSVMIAGESGTGKEVVARAIHKLSDRHAKPFIAINCAAIPEQLLESELFGYVK 346

Query: 356 GAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVGSNHATKVD 415
           GAFTGAS  G  G ++ A+ G LFLDEI D+PL  Q++LL  ++ + + PVG++H  +VD
Sbjct: 347 GAFTGASANGKTGLIQAANSGTLFLDEIGDMPLTLQAKLLRAIESREIQPVGASHPVQVD 406

Query: 416 IQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQRQ-DRQALIH---HIHR-RY 470
           I+II+AT++NLE  + +G FR+DLYYRL+ + + LP  ++RQ D + LIH   H+H  R 
Sbjct: 407 IRIISATNQNLELYIAEGKFREDLYYRLNVIPLRLPPLRERQEDIELLIHYFLHLHTGRL 466

Query: 471 SDAGQQICGDLMQRLLAYHWPGNLRELDSLIK-VASLMAEGEGVLTFNHLPTHL------ 523
           +     +  D++  L  Y WPGN+REL +L++ + +++  GE ++  + LP +L      
Sbjct: 467 NLVYPGVAQDVIDFLKRYRWPGNIRELSNLMEYLVNVVPSGE-IIDMSLLPPNLLSSSEL 525

Query: 524 -AQKLSHAAPTAT-EDDQQKDIKSTVEASLLKTYQATQGNISQTSRLLGLSRNTIYRKLK 581
            +Q  S A+  AT   ++       +E  +++   +   N  Q +  LG+   T+YRK+K
Sbjct: 526 ASQPPSSASAAATLAQEENVTALEEMERQMIRDALSRYSNKKQAADELGIGIATLYRKIK 585