Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., nitrogen assimilation regulatory protein from Klebsiella michiganensis M5al

 Score =  190 bits (483), Expect = 1e-52
 Identities = 125/335 (37%), Positives = 182/335 (54%), Gaps = 26/335 (7%)

Query: 276 TPASDLHFGDAEVERCWQQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVA 335
           +P +D+      ++  ++   R+    I +LI G++G GK     ALH++S R   P +A
Sbjct: 135 SPTADIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHSPRAKAPFIA 194

Query: 336 VNCGALAKELVEAELFGYVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLL 395
           +N  A+ K+L+E+ELFG+  GAFTGA+    QG+   AD G LFLDEI D+PLD Q+RLL
Sbjct: 195 LNMAAIPKDLIESELFGHEKGAFTGANTVR-QGRFEQADGGTLFLDEIGDMPLDVQTRLL 253

Query: 396 HVLQDKTVLPVGSNHATKVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSF-Q 454
            VL D     VG     KVD++IIAATH+NLE  V +G FR+DL++RL+ + V LP   +
Sbjct: 254 RVLADGQFYRVGGYAPVKVDVRIIAATHQNLELRVQEGKFREDLFHRLNVIRVHLPPLRE 313

Query: 455 QRQDRQALIHHI----HRRYSDAGQQICGDLMQRLLAYHWPGNLRELDSLIKVASLMAEG 510
           +R+D   L  H      R      +Q+  +    L    WPGN+R+L++  +  ++MA G
Sbjct: 314 RREDIPRLARHFLQIAARELGVEAKQLHPETEMALTRLAWPGNVRQLENTCRWLTVMAAG 373

Query: 511 EGVLT----------------FNHLPTHLAQKLSHAAPTATEDDQQ---KDIKSTVEASL 551
           + VLT                   LP   A  L   A  A     Q    + +  +E +L
Sbjct: 374 QEVLTQDLPSELFETAIPDNPTQMLPDSWATLLGQWADRALRSGHQNLLSEAQPEMERTL 433

Query: 552 LKT-YQATQGNISQTSRLLGLSRNTIYRKLKALGI 585
           L T  + TQG+  + +RLLG  RNT+ RKLK LG+
Sbjct: 434 LTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 468