Pairwise Alignments

Query, 587 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., AAA-family response regulator tacA from Caulobacter crescentus NA1000

 Score =  192 bits (489), Expect = 2e-53
 Identities = 117/326 (35%), Positives = 189/326 (57%), Gaps = 34/326 (10%)

Query: 293 QQANRVIDKDIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVEAELFG 352
           +   R     I +LI G++GVGK    +A+H +S R   P VAVNCGA+ + LVE+ LFG
Sbjct: 156 RMGERAAKSGIPVLITGESGVGKELIARAVHGSSDRAGKPFVAVNCGAIPENLVESILFG 215

Query: 353 YVAGAFTGASHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVGSNHAT 412
           +  G+FTGA+ K + GK + AD G LFLDE+ +LPLD Q +LL  LQ+  + P+GS  + 
Sbjct: 216 HEKGSFTGATDK-HLGKFKEADGGTLFLDEVGELPLDMQVKLLRALQEGEIDPIGSKRSI 274

Query: 413 KVDIQIIAATHKNLEQLVTQGLFRQDLYYRLSDLVVELPSFQQR-QDRQALIHHIHRRYS 471
           KVD++I++AT+++L+Q V+ G FR+DL+YRL+   +E PS ++R +D  AL+    RR++
Sbjct: 275 KVDVRIVSATNRDLQQAVSGGRFREDLFYRLNVFPIEAPSLRERREDIPALVEAFIRRFN 334

Query: 472 -DAGQQICG---DLMQRLLAYHWPGNLRELDSLIKVASLMAEGEGVLTFNH--------- 518
            + G+++ G   + MQ L ++ WPGN+R+L++ +  A ++A+   +  F+          
Sbjct: 335 VEEGKRVIGASPETMQLLTSFDWPGNVRQLENTVYRAIVLADAPYLQPFDFPAISGLAAP 394

Query: 519 ----------------LPTHLAQKLSHA-APTATEDDQ-QKDIKSTVEASLLK-TYQATQ 559
                             TH A   + A AP    DD+        +E  L++       
Sbjct: 395 IEAVSISPSPPPAALLQATHAAMAAAVAEAPVRILDDRGHLRTLEEIERDLIQHAIDVYA 454

Query: 560 GNISQTSRLLGLSRNTIYRKLKALGI 585
           G++S+ +R LG+ R+T+YRK++  GI
Sbjct: 455 GHMSEVARRLGIGRSTLYRKVREQGI 480