Pairwise Alignments

Query, 235 a.a., SDR family oxidoreductase from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., short-chain dehydrogenase/reductase SDR (RefSeq) from Shewanella loihica PV-4

 Score = 86.3 bits (212), Expect = 5e-22
 Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 20/241 (8%)

Query: 2   NIVIIGGSGGIGLAMVQEALNRFSEANVHATYHSTTPTWQ-----HPRLTWHALDATQEA 56
           ++VI G + GIGL  V+  L +    +      +           H  L    LD T + 
Sbjct: 4   HVVITGANRGIGLGFVRHYLAKGDRVSACCRQPAQASALIQLAEIHANLNIIQLDVTDDV 63

Query: 57  QVQALSEQFSQ--VDWLINCVGVLHTASKGPEKNLNALDADFFLYNLIHNALPSLLLAKH 114
            V AL +  +   +D LIN  G       G       L A  +   L  N +  +++ + 
Sbjct: 64  SVHALPQHLNDAAIDILINNAGYYGPKGIG----FGQLRAAEWQKVLAVNTIAPIMVTQI 119

Query: 115 FTAKLKQSEAAKFATLSAKVGSICDNQLGGWYSYRASKAALNMLLKTLAIEWQRSLKKGV 174
               L+++  AK   +S+K+GS+ DNQ GG Y YR+SKA LN  LK+LAI+   S ++  
Sbjct: 120 CYPMLQKATNAKVICISSKMGSMADNQSGGSYLYRSSKAGLNAALKSLAID--LSSEEIY 177

Query: 175 VLALHPGTTDTKLSAPFHSNVAPDKLFSPARVAHDLIGLIAAATPEQSGGFYAYDGQTLP 234
            LA HPG   T +         P+ L +       +   I      QSG F  +DGQ +P
Sbjct: 178 CLAFHPGWVQTDMG-------GPNALITVNEAVDQMARCIENLDATQSGQFLNFDGQQIP 230

Query: 235 W 235
           W
Sbjct: 231 W 231