Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  106 bits (264), Expect = 2e-27
 Identities = 123/446 (27%), Positives = 185/446 (41%), Gaps = 61/446 (13%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEA--KKRFLNQ 64
           L W  +DLR++DN  L  A+ Q          P +  +L    Q     +A  K  F  +
Sbjct: 3   LIWLRSDLRLHDNTALTAAAAQG---------PCVAVYLTSPEQWRAHDDAPCKIDFWLR 53

Query: 65  TLADLDHSLSTLGQKLWVTPLLPY----QALRHLLTQVEITDIYVDAVAGSDERQAIARI 120
            L+ L  +L+ L   L +     +    Q L  L  ++ +  ++V+   G +E +  A +
Sbjct: 54  NLSALSAALAELNIPLLIRAAAHWHQAPQVLLKLCRELNVDAVHVNEEYGLNETRRDAEV 113

Query: 121 HQDFSS--VHIHQQALHSLLSEPQLPFALEALPSTFTQFRKQVET-ISLSAPMGYPHVLP 177
            +  +   V  H      L     +          F+QFRK   + + LS P     V  
Sbjct: 114 ARTLNDQGVEFHSHLDQLLFKPGSVLTKTGNYFQVFSQFRKVCYSRLHLSLPS---LVAT 170

Query: 178 PIEQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPSRYKETRNGLDGM----- 232
           P  Q        I  +P     V  +  G         +L P+   E R  LD       
Sbjct: 171 PARQA----STGIARDP-----VPTQVDGFAPPSEALRALWPAGETEARRRLDTFVDQHI 221

Query: 233 -------DY-----STKFSPWLALGAVSPKT-IYAMLQ--RYEAVHGANDSTYWIFFELL 277
                  DY     +++ S +L  G VSP+  ++A LQ  + E   G   +  WI  ELL
Sbjct: 222 DDYQGERDYPARPGTSQLSAYLVAGVVSPRQCLHAALQANQGEFESGNAGAVTWIN-ELL 280

Query: 278 WREYF----YWYARRYGAKLFRFSGIGEKKPLTSFYAQRFLQ-WKHGETPFPIVNACMRQ 332
           WRE++      Y R    + FR     E + L    A   L+ WK   T  PI++A MRQ
Sbjct: 281 WREFYKHILVGYPRVSRHRAFR----PETEALAWRKAPAELEAWKQARTGLPIIDAAMRQ 336

Query: 333 LNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADP 392
           + +TG+M NR R +VA  L   L +DWR G  +F   L+D D+ +N G WQ+ A  G D 
Sbjct: 337 MLETGWMHNRLRMVVAMFLTKNLLIDWREGERFFMQHLIDGDLAANNGGWQWSASTGTDS 396

Query: 393 R-GSRQFNLEKQAHTYDPKGEFVAKW 417
               R FN   Q+  +D +G F+  W
Sbjct: 397 APWFRIFNPLSQSEKFDREGLFIKHW 422