Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Deoxyribodipyrimidine photolyase from Pseudomonas stutzeri RCH2

 Score =  120 bits (300), Expect = 1e-31
 Identities = 124/451 (27%), Positives = 198/451 (43%), Gaps = 71/451 (15%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEA--KKRFLNQ 64
           L+W  NDLR +DN  L  A         +   P++  +L    Q     +A  K  F  +
Sbjct: 4   LFWLRNDLRTSDNSALTSA---------MAAGPTVAIYLITPGQWLAHDDAPCKVDFWLR 54

Query: 65  TLADLDHSLSTLGQKLWVTPLLPYQ----ALRHLLTQVEITDIYVDAVAGSDERQAIARI 120
            L +L   L  L   L +  +  +Q    AL  L  ++++  ++ +   G +ER+    +
Sbjct: 55  NLVELSAQLRALNVPLLIREVDDWQSVPAALLKLCQELDVHGLHYNEEYGVNERRRDRTV 114

Query: 121 HQDFSSV------HIHQQ--ALHSLLSEPQLPFALEALPSTFTQFRKQVET---ISLSAP 169
                +       H+ Q   A  ++L++    F +      F+QFRKQ  +   +SL   
Sbjct: 115 AATLGACGVLVRGHVDQVLFAPGTVLTQSGGHFKV------FSQFRKQCLSRLAVSLPPC 168

Query: 170 MGYPHVLPPIEQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPSR-------- 221
           +G P    P+          I ++P  +A      AG     +Y  +L P+         
Sbjct: 169 VGVPAAQAPLP---------IASDPVPTAV-----AGFPRPTDYLRALWPAGEAFAQRRL 214

Query: 222 ----------YKETRNGLDGMDYSTKFSPWLALGAVSPKT-IYAML--QRYEAVHGANDS 268
                     Y E R+ L     +++ S +LA G +S +  ++A L   + E   G+  +
Sbjct: 215 ALFVEDDLDLYHERRD-LPAEPGTSQLSAYLAAGVISVRQCLHAALGYNQGELDSGSTGA 273

Query: 269 TYWIFFELLWREYFYWYARRYGAKLFRFSGIGEKKPLTSFYAQRFLQ-WKHGETPFPIVN 327
           T WI  ELLWRE++      +       +   E   L   +A   L+ W+ G T FPIV+
Sbjct: 274 TTWIN-ELLWREFYKHVLDGHPRLSMHRAFRSETDALPWRHAPYELEAWQQGRTGFPIVD 332

Query: 328 ACMRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAG 387
           A MRQL +TG+M NR R +VA  L   L +DWR G  +F   L+D D+ +N G WQ+ A 
Sbjct: 333 AAMRQLQETGWMHNRLRMVVAMFLSKNLLIDWREGERWFMRHLIDGDLAANNGGWQWSAS 392

Query: 388 VGADP-RGSRQFNLEKQAHTYDPKGEFVAKW 417
            G D     R FN   Q+  +DP G+F+ +W
Sbjct: 393 TGTDSVPYFRLFNPISQSQRFDPSGQFLRRW 423