Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., deoxyribodipyrimidine photo-lyase type I from Pseudomonas syringae pv. syringae B728a

 Score =  116 bits (290), Expect = 2e-30
 Identities = 120/444 (27%), Positives = 189/444 (42%), Gaps = 45/444 (10%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEA--KKRFLNQ 64
           L W  +DLR  DN  L  A ++          P++  +L   AQ     +A  K  F  +
Sbjct: 3   LIWLRSDLRAQDNTALTAAMERG---------PTLAVYLLSPAQWRSHDDADCKVDFWLR 53

Query: 65  TLADLDHSLSTLGQKLWVTPLLPY----QALRHLLTQVEITDIYVDAVAGSDERQAIARI 120
            L +L+ +L  L   L +     +    + L  L TQ ++  ++++   G +E +    +
Sbjct: 54  NLVELEKALGELNVPLLIREADTWDQAPEVLATLCTQFKVEGLHLNQEYGINETRRDQAV 113

Query: 121 HQDFSSVHIHQQA-LHSLLSEP-QLPFALEALPSTFTQFRKQVETISLSAPMGYPHVLPP 178
            +      +H  + L  LL +P  +          FTQF+K   T  L   M +P V  P
Sbjct: 114 QKAMGKAGVHFNSYLDQLLFKPGSILTKTGNYFQVFTQFKKVCYT-RLHEAMPHP-VRTP 171

Query: 179 IEQGWQLPLMDIV----------TEPNHSAFVGGEQAGLTHCQNYFSSLLPSRYKETRNG 228
             Q  Q    D V          ++     +  GE         + +  +   Y +T   
Sbjct: 172 QAQAAQSIKSDAVPKQVKGFATPSKALRDLWPAGEAEARRRMDAFAAEQIS--YYKTERD 229

Query: 229 LDGMDYSTKFSPWLALGAVSPKT-IYAMLQRYEAVHGAND--STYWIFFELLWREYF--- 282
                 +++ S +LA G +SP+  ++A L   +      D  +  WI  ELLWRE++   
Sbjct: 230 FPAKPGTSQLSAYLAAGVISPRQCLHAALASNQGEFETGDVGTVTWIN-ELLWREFYKHT 288

Query: 283 -YWYARRYGAKLFRFSGIGEKKPLTSFYAQRFLQ-WKHGETPFPIVNACMRQLNQTGYMS 340
              Y R    + FR     E + L    A   L+ W+   T  PI++A MRQL +TG+M 
Sbjct: 289 LVGYPRVSRHRAFR----PETEALKWRDAPEELRAWQEARTGLPIIDAAMRQLLETGWMH 344

Query: 341 NRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQFN 399
           NR R +VA  L   L +DWR G  +F   L+D D+ SN G WQ+ +  G D     R FN
Sbjct: 345 NRLRMVVAMFLTKNLLIDWREGERFFMRHLIDGDLASNNGGWQWSSSTGTDSAPYFRIFN 404

Query: 400 LEKQAHTYDPKGEFVAKWCGTACD 423
              Q+  +DP+G F+ +W     D
Sbjct: 405 PLSQSERFDPEGVFIKRWLPELAD 428