Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 484 a.a., Deoxyribodipyrimidine photo-lyase type I from Synechococcus elongatus PCC 7942

 Score =  125 bits (314), Expect = 3e-33
 Identities = 122/448 (27%), Positives = 186/448 (41%), Gaps = 65/448 (14%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKRFLNQTL 66
           L+W   DLR++DN  L  A  Q  +LI L+C         +  Q      A+  +L   L
Sbjct: 6   LFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDP------QILQSADMAPARVAYLQGCL 59

Query: 67  ADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIY----VDAVAGSDERQAIARIHQ 122
            +L       G +L +    P   +  L  Q++   +Y    ++      + Q  A +  
Sbjct: 60  QELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKT 119

Query: 123 -DFSSVHIHQQALHS---LLSEPQLPFAL--------EALPSTFTQFRKQVETISLS--- 167
               +V +  Q LHS   +LS    P+++        +A P   T      E + LS   
Sbjct: 120 AGIRAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQPKP-TPVATPTELVDLSPEQ 178

Query: 168 ----APMGYPHVLPPIEQ---GWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPS 220
               AP+     LP ++Q    W         EP  +A +   Q     C    +   P 
Sbjct: 179 LTAIAPLLLSE-LPTLKQLGFDWD---GGFPVEPGETAAIARLQE---FCDRAIADYDPQ 231

Query: 221 RYKETRNGLDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFF---ELL 277
           R      G  G+      SP L  GA+  +  +       A+  ++++   I     EL 
Sbjct: 232 RNFPAEAGTSGL------SPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELA 285

Query: 278 WREYFYWYARRYGAKLFRFSGIGEKKPLTSFYAQ--------RFLQWKHGETPFPIVNAC 329
           WRE FY +A      L+ F  + +  P  S + Q         F  W   +T +PIV+A 
Sbjct: 286 WRE-FYQHA------LYHFPSLADG-PYRSLWQQFPWENREALFTAWTQAQTGYPIVDAA 337

Query: 330 MRQLNQTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVG 389
           MRQL +TG+M NR R +VAS L  +L +DWR G  +F   LVD D+ +N G WQ+ A  G
Sbjct: 338 MRQLTETGWMHNRCRMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSG 397

Query: 390 ADPRGSRQFNLEKQAHTYDPKGEFVAKW 417
            DP+  R FN   QA  +D    ++ +W
Sbjct: 398 MDPKPLRIFNPASQAKKFDATATYIKRW 425