Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., Deoxyribodipyrimidine photolyase (NCBI) from Rhodospirillum rubrum S1H

 Score =  121 bits (304), Expect = 4e-32
 Identities = 120/449 (26%), Positives = 189/449 (42%), Gaps = 49/449 (10%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKRFLNQTL 66
           L WF +DLR+ DNP L  A      +I  Y     T    R       G A + +L ++L
Sbjct: 6   LVWFRDDLRLADNPALCAALDSGAPVIPFYLLDDSTSDGHR-----PLGGATRWWLGRSL 60

Query: 67  ADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQDFSS 126
             L  S++  G +L +       A+  L  + +   ++ + + G D       +  D   
Sbjct: 61  TSLAESIAQRGGRLVLRRGEALSAVPELAAETDAAALFANRLYGMDS------LRDDDLF 114

Query: 127 VHIHQQALHSLLSEPQLPFALEALPS-------TFTQFRKQVE-TISLSAPMGYPHVLPP 178
           + +    L   L +  L    EA+ +        FT F K +  T+    P+  P   PP
Sbjct: 115 MVLRVAGLTVRLFDSGLLHRPEAVTTKTGRPFRVFTPFWKTLSATLDPGLPLAAPDSFPP 174

Query: 179 IEQGWQLP--LMDIVTEPNHSAFVGGE----QAGLTHCQNYFSSLLPSRYKETRNGLDGM 232
           ++        L D   EP    + GG     Q G    Q    +       +  +G D  
Sbjct: 175 VDDPPPASDSLADWSLEPTTPDWAGGLRDTWQPGEAGAQARLEAFFNGPVADYASGRDRP 234

Query: 233 D--YSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYARRYG 290
           D   ++K SP L  G +SP+ ++    R+    G  D+      EL WRE+ +       
Sbjct: 235 DKPLTSKLSPHLRFGEISPRQVWTAA-RHHPPGGGMDA---FLRELGWREFCHHL----- 285

Query: 291 AKLFRFSGIGEKKPLTSFYAQRFLQ----------WKHGETPFPIVNACMRQLNQTGYMS 340
             LF+   + E+     F A  + +          W+ GET +PIV+A MR+L  TG+M 
Sbjct: 286 --LFQAPTMAEEPLKAEFLAFPWTEAKEIGPALAAWQSGETGYPIVDAGMRELWHTGWMH 343

Query: 341 NRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQFN 399
           NR R + AS L+ +L + W++G  +F   LVD    +N   WQ++AG GAD     R FN
Sbjct: 344 NRVRMIAASFLIKDLLIPWQHGERWFWDTLVDACPANNAAGWQWVAGCGADAAPFFRIFN 403

Query: 400 LEKQAHTYDPKGEFVAKWCGTACDKLNAL 428
              Q   +DP+G +V +W     D  ++L
Sbjct: 404 PVTQGERFDPEGAYVRRWLPELADLPSSL 432