Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., deoxyribodipyrimidine photo-lyase from Rahnella sp. WP5

 Score =  126 bits (316), Expect = 2e-33
 Identities = 127/449 (28%), Positives = 195/449 (43%), Gaps = 57/449 (12%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKR--FLNQ 64
           L WF NDLR+ DN  L  A +     +       I  F+A   Q  Q   A ++  F+ Q
Sbjct: 5   LVWFRNDLRITDNRALHAACEDPQARV-------IAVFVATPEQWKQHEMAPRQAMFIYQ 57

Query: 65  TLADLDHSLSTLGQKLWVTPLLPYQA----LRHLLTQVEITDIYVDAVAGSDERQAIARI 120
            L  L H+L   G  L       +      L+      ++  ++ +     +ERQ  A +
Sbjct: 58  HLQALQHALVERGIGLHYHQCDDFADSVTWLKDFCKTEKVDALFYNKQYEINERQRDAAL 117

Query: 121 HQDFSSVHIHQQALHSLLSEP-QLPFALEALPSTFTQFRK-------QVETISLSAPMG- 171
               S   I      SLL  P  +      +   +T FR+       + ++ SL AP   
Sbjct: 118 ENAVSESVICHAFDDSLLLPPGSVMTGNNEMYKVYTPFRRAFLSRLTESDSRSLPAPQAR 177

Query: 172 ------YPHVLPPIEQGWQLPLMDIVTEPNHSAFVGGEQAGLTHCQNYFSSLLPSRYKET 225
                   H L P +     PL DI        F  GE+A     +++    +   Y E 
Sbjct: 178 ENAEKVVTHRLMPFDY----PLADIGDH-----FAIGEEAARNRLRSFCREQVQD-YLEQ 227

Query: 226 RNGLDGMDYSTKFSPWLALGAVSPKTIYAMLQRY--EAVHGANDSTYWIFFELLWREYFY 283
           R+ L  +D ++  SP+LA+G +SP+     L+    + +   +   +    EL+WRE+  
Sbjct: 228 RD-LPAVDGTSSLSPYLAIGVLSPRQCLNRLRAECPDVLEKTDGGAFGWLNELVWREF-- 284

Query: 284 WYARRYGAKLFRFSGIGEKKPLTSF-------YAQRFLQ-WKHGETPFPIVNACMRQLNQ 335
                Y   +  +  + + +P  ++       +A   LQ WK G+T +PIV+A MRQLN 
Sbjct: 285 -----YRHLIVAWPKLCKHQPFVAWTDNVRWRHAPDDLQAWKDGKTGYPIVDAGMRQLNA 339

Query: 336 TGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG- 394
           TG+M NR R +VAS LV +L ++WR G  YF +QL+D D+ +N G WQ+ A  G D    
Sbjct: 340 TGWMHNRLRMIVASFLVKDLLINWREGERYFMSQLLDGDLAANNGGWQWGASTGTDAAPY 399

Query: 395 SRQFNLEKQAHTYDPKGEFVAKWCGTACD 423
            R FN   Q   +D  G F+  W     D
Sbjct: 400 FRIFNPTTQGERFDKTGCFIKAWVPELAD 428