Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., deoxyribodipyrimidine photo-lyase PhrB from Phaeobacter inhibens DSM 17395

 Score = 98.2 bits (243), Expect = 5e-25
 Identities = 115/429 (26%), Positives = 179/429 (41%), Gaps = 36/429 (8%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKRFLNQTL 66
           ++W   DLR+ DNP L  A      +I ++ + ++   L         G A +  L   L
Sbjct: 12  IWWVRRDLRLADNPALAAAVAAGVPVIPVFIFETLDEDL---------GAAPRFRLGLGL 62

Query: 67  ADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAV--AGSDERQAIAR---IH 121
           A L   L   G +L    +L     + +LTQ+ IT+    AV    + + QAIAR   I 
Sbjct: 63  AHLAKELEQRGARL----ILRRGPAQEVLTQL-ITETGAGAVHWTRAYDPQAIARDTGIK 117

Query: 122 QDFSSVHIHQQALHS-LLSEP-QLPFALEALPSTFTQFRKQVETISLSAPMGYPHVLPPI 179
           +      I  ++    LL EP  +      +   ++ + K V    +   +  P  +P  
Sbjct: 118 EQLKGQGIAAKSFGGHLLFEPWTVETKTGGMYRVYSPYWKSVRDRDVDGLIAAPSRIPAP 177

Query: 180 EQGW----QLPLMDIVTEPNHSAFVGGE--QAGLTHCQNYFSSLLPSR---YKETRNGLD 230
              W     L    +       A V  +  + G    Q   +  L +R   YK+ R+   
Sbjct: 178 AH-WPTSDDLDSWQMAAAMRRGADVVAQYCRVGEDAAQERLAEFLDTRVADYKQDRD-FP 235

Query: 231 GMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYARRYG 290
            +D ++  S  LA G +SP+ ++      EA             E++WRE+ Y       
Sbjct: 236 AVDATSGLSENLAWGEISPRRMWH--HGLEARRAGKSGAEHFLKEIVWREFAYHLMFHTP 293

Query: 291 AKLFR-FSGIGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVAS 349
             L R +    E    +     +   W+ G+T +  V+A MR+L  TG M NR R +VAS
Sbjct: 294 HILTRNWRPEWEHFNWSERDDDKVDAWRRGQTGYNFVDAAMRELYVTGKMHNRARMIVAS 353

Query: 350 CLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQFNLEKQAHTYD 408
            L   +   WR G  +FE  LVD+D  SN   WQ++AG G D     R FN + Q   +D
Sbjct: 354 FLTKHMLTHWRIGQQWFEECLVDWDPASNAMGWQWVAGSGPDASPFFRIFNPDGQLEKFD 413

Query: 409 PKGEFVAKW 417
           PKG + + W
Sbjct: 414 PKGRYQSAW 422