Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., deoxyribodipyrimidine photolyase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  223 bits (569), Expect = 7e-63
 Identities = 137/430 (31%), Positives = 220/430 (51%), Gaps = 21/430 (4%)

Query: 1   MSKKIGLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKR 60
           MSKKI L WF NDLR++DN +L +A  + D ++ +Y     +    +Y    + G  + +
Sbjct: 1   MSKKI-LVWFRNDLRLHDNEMLVEAIAKSDSILPVYILDRRSFGETKYGT-LKTGNIRAQ 58

Query: 61  FLNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARI 120
           F+ +++  L +SL  +G  L +    P   +  L  + EIT++Y       +E      +
Sbjct: 59  FILESVLGLRNSLKQIGGNLLIAEGNPEDIIPQLAQEYEITEVYHHREVAREETHVSTLV 118

Query: 121 HQDFSSVHIHQQAL--HSLLSEPQLPFALEALPSTFTQFRKQVETISLSAPMGYP----H 174
                 + I+ +    H+L ++  LPF ++ +P  F QF+K++E  S+  P        +
Sbjct: 119 ENALWKLRINLKHFIGHTLYNKEDLPFPIKDIPDAFNQFKKKIERDSIIKPCFLAPDRIN 178

Query: 175 VLPPIEQGWQLPLMDIVTEPNHS------AFVGGEQAGLTHCQNYFSSLLPSRYKETRNG 228
           V   I+ G    L D+   P          FVGGE  GL H Q    ++   +   T+N 
Sbjct: 179 VAEVIDWGILPSLADLDLLPQQKDQRADFEFVGGEAEGLAHLQKVIVAM--QQAATTKN- 235

Query: 229 LDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYARR 288
              +  ++K S WLA+G++SP+ +Y  +++ E V         I   LLWR+YF +  ++
Sbjct: 236 ---LILASKLSAWLAMGSLSPRKVYWEIKKMEGVPNTKAMFNHILLGLLWRDYFRFMFKK 292

Query: 289 YGAKLFRFSGIGEKKPLTSFYAQ-RFLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLV 347
           YG   F   G G +  +     Q  F +WK+ +T F +V+A M +LNQTG++SN  RQ  
Sbjct: 293 YGNTFFSPDGFGSQGLIDIVNEQDNFNKWKNAQTGFAVVDAVMTELNQTGFISNIARQTA 352

Query: 348 ASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGSRQFNLEKQAHTY 407
           A  L++ L + W +GAAYFE +L+DY+  SNWGNW  +AGVG D +    F+L+K     
Sbjct: 353 ALYLINNLEVSWIFGAAYFEEKLIDYNPASNWGNWANVAGVGNDQKSKSVFDLDKNIKNL 412

Query: 408 DPKGEFVAKW 417
           DPKG +   W
Sbjct: 413 DPKGNYSLTW 422