Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., deoxyribodipyrimidine photolyase from Marinobacter adhaerens HP15

 Score =  126 bits (316), Expect = 2e-33
 Identities = 122/440 (27%), Positives = 191/440 (43%), Gaps = 54/440 (12%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQWGEAKKRFLNQTL 66
           L WF NDLRV DNP L  A +  + +   +    +TP      Q+  W  A+ +F+    
Sbjct: 4   LVWFRNDLRVADNPALTAACESSEEVRACFI---LTP---DQWQEHDWSPARVQFVVAHA 57

Query: 67  ADLDHSLSTLGQKLWVTPLLPYQ-ALRHLLTQVE---ITDIYVDAVAGSDERQAIARIHQ 122
             L   L+ LG  L       +  +L  L +  E   +T ++ +   G +ER+    +  
Sbjct: 58  NALAEELAKLGIPLSFIQAKRFDDSLGKLESHCEEHGVTALHFNEEYGVNERKRDKALKH 117

Query: 123 DFSSVHIHQQALHS--------LLSEPQLPFALEALPSTFTQFRKQVET-ISLSAPMGYP 173
            F  + I  +            +L++   P+      S FT F ++  + I  + P  +P
Sbjct: 118 RFDQLGIAVRKYRDQTVAPVGEILTQQNDPY------SVFTPFSRRWRSWIEETHPGLFP 171

Query: 174 HVLPPIEQGWQLP--LMDIVTEPNHSA----FVGGEQAGLTHCQNYFSSLLPSRYKETRN 227
               P  +G  +    +D + E    A       GE A     + +        YKE R+
Sbjct: 172 ---TPKARGNAVSPEQIDAIPEAFRDAPEPLVATGEDAAHDQLERFLEKR-GGAYKEKRD 227

Query: 228 GLDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYF----Y 283
               +D +++ SP+LA G +S +      ++ +   G  +       E+ WR+++    Y
Sbjct: 228 -FPAIDGTSQISPYLANGVLSGRQCLIAGRQAQGAGGNQEGLGTWITEIAWRDFYINILY 286

Query: 284 WYARRYGAKLFRFSGIGEKKPLTSFY-----AQRFLQWKHGETPFPIVNACMRQLNQTGY 338
            + R    + F        KP T          RF  WK G T  PIV+A MRQLNQTG+
Sbjct: 287 HFPRVSMHRAF--------KPETETLEWNNPGDRFEAWKTGNTGVPIVDAAMRQLNQTGW 338

Query: 339 MSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG-SRQ 397
           M NR R + A  L   L +DWR G AYF ++L+D  + SN G WQ+ A  G D     R 
Sbjct: 339 MHNRLRMITAMYLTKNLFIDWRLGEAYFMSKLIDGFLASNNGGWQWSASTGTDAAPYFRV 398

Query: 398 FNLEKQAHTYDPKGEFVAKW 417
           FN   Q+  +DP G+F+ +W
Sbjct: 399 FNPVTQSERFDPDGDFIREW 418