Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., deoxyribodipyrimidine photolyase from Marinobacter adhaerens HP15

 Score =  372 bits (955), Expect = e-107
 Identities = 214/459 (46%), Positives = 264/459 (57%), Gaps = 44/459 (9%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITP--FLARYAQQTQWGEAKKRFLNQ 64
           LYWFT DLR++DN  L  AS+  D L+CLY    + P  F     Q    G+ + RFL Q
Sbjct: 4   LYWFTRDLRLHDNASLLAASKS-DMLLCLYV---VDPRWFAPGPLQSKAMGDHRWRFLWQ 59

Query: 65  TLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQDF 124
           +L  L+ SL  LGQ+L +    P   +  L     I  +    + G+ E      I    
Sbjct: 60  SLMALERSLRPLGQRLHIAFGEPETVIPQLAHAHSIERVVRSRLPGTQEAGQWQAIKDRL 119

Query: 125 SSVHIHQQALHSLLSEPQLPFALEALPSTFTQFRKQVETI--------------SLSAPM 170
                 Q    SL +E  LP ALE LP TF+QFRKQVE                +L  P 
Sbjct: 120 PKAVFQQFETLSLFTEGSLPMALEELPDTFSQFRKQVEKTGDRCSERLRIRTLTALPPPP 179

Query: 171 GYPHV----LPPIEQGWQLPLMDIVTEPNHSA-FVGGEQAGLTHCQNY-FSSLLPSRYKE 224
           G+P       PPI             EP H   F+GGE AGL   Q + + +    RYKE
Sbjct: 180 GFPEDNRGDCPPIP------------EPVHPLQFMGGEAAGLARLQEFLYGNHSIDRYKE 227

Query: 225 TRNGLDGMDYSTKFSPWLALGAVSPKTIYAMLQRYEAVHGANDSTYWIFFELLWREYFYW 284
           TRN LD  D S+KFSPWLA G +S + +   +  YEA    N+STYW++FELLWREYFYW
Sbjct: 228 TRNALDTWDASSKFSPWLANGCLSVREVAETITEYEASETKNESTYWLWFELLWREYFYW 287

Query: 285 YARRYGAKLFRFSGIGEKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSNRGR 344
           YA ++GA LFR  G+  K+   +FY  RF  W  G T +PIVNA M QL +TGYMSNR R
Sbjct: 288 YALKHGANLFRRDGVQRKRRHGTFYGHRFKAWCQGNTEYPIVNAAMNQLRETGYMSNRAR 347

Query: 345 QLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGSRQFNLEKQA 404
           QLVASC ++ELGLDWRYGAA+FE QL+DYDVGSN+GNWQYLAGVGADPRG RQFNLEKQ 
Sbjct: 348 QLVASCFINELGLDWRYGAAWFEEQLIDYDVGSNYGNWQYLAGVGADPRGLRQFNLEKQT 407

Query: 405 HTYDPKGEFVAKWCGTACDKLNALENLALDSVDMVDWPI 443
             YDP G F+ +W G      +A + + L +VD  DWP+
Sbjct: 408 QQYDPTGTFIDRWGG------HADQPVGLHTVDAADWPL 440