Pairwise Alignments

Query, 461 a.a., cryptochrome DASH from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., deoxyribodipyrimidine photo-lyase from Dyella japonica UNC79MFTsu3.2

 Score =  118 bits (295), Expect = 5e-31
 Identities = 122/444 (27%), Positives = 194/444 (43%), Gaps = 61/444 (13%)

Query: 7   LYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQQTQW--GEAKKRFLNQ 64
           + WF  DLR+ DNP L  A  + +R++ +Y +           ++  W  G A + +L+ 
Sbjct: 4   IVWFRRDLRLADNPALAAACAEHERILPVYVHAP--------DEEDAWAPGAASRWWLHH 55

Query: 65  TLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEITDIYVDAVAGSDERQAIARIHQD- 123
           +LA L  +L   G  L +       +L  +      T +Y +       R   A I +D 
Sbjct: 56  SLAALSAALRREGGHLHIRAGDTLASLVAMCRAAGATAVYWN------RRYEPAAIERDK 109

Query: 124 FSSVHIHQQALHS------LLSEP-QLPFALEALPSTFTQFRKQVETISLSAPMGYPHVL 176
                + +Q + +      L  EP Q+    +     FT F + +    LS     P  +
Sbjct: 110 HIKAALREQGIEAKSFNAALWVEPWQVATQQDGPYRVFTPFWRAIRP-RLSPEELLP--V 166

Query: 177 PPI--------EQGWQLPLMDIVT--EPNHSAFVGGEQAGLTHCQNYFSSLLPSRYKETR 226
           PP+        E    L L+  +   +  H  +  GEQ  L   + +    L   Y   R
Sbjct: 167 PPLRFATAKDGESSASLELLPRIRWDQGMHETWTPGEQGALEALEVFADDALGG-YARLR 225

Query: 227 NGLDGMDYSTKFSPWLALGAVSPKTIYAML----QRYEAVHGANDSTYWIFFELLWREYF 282
           + L     +++ SP L  G +SP+ ++ +L    QR  A+H  +   +    EL WRE+ 
Sbjct: 226 D-LPARHGTSRLSPHLHYGEISPRQVHHILHRGTQRRAAMHRPDLEPF--LRELGWREFA 282

Query: 283 YWYARRYGAKLFRFSGIGEKKPLTSFYAQRFLQ--------WKHGETPFPIVNACMRQLN 334
           +         LF F     +     F + R+ +        W+HG T  P+V+A MR+L 
Sbjct: 283 HHL-------LFHFPETPTENFNQGFASFRWAEPDQALLDRWRHGRTGIPLVDAGMRELW 335

Query: 335 QTGYMSNRGRQLVASCLVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRG 394
            TG+M NR R +VAS L   L   WR GA +F   LVD D+ +N   WQ++AG GAD   
Sbjct: 336 HTGWMHNRVRMVVASFLTKNLRQHWREGAKWFWDTLVDADLANNTLGWQWVAGCGADAAP 395

Query: 395 -SRQFNLEKQAHTYDPKGEFVAKW 417
             R FN   QA  +DP+G+++ +W
Sbjct: 396 YFRVFNPVAQARKFDPEGDYLRRW 419