Pairwise Alignments

Query, 383 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a

 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 20/215 (9%)

Query: 112 HFKLFRNPFINDIRAVRDIYMNEDSRYVLAAMKDVAR-NQGILAVVGDSGAGKSVLRRLL 170
           H++L  +PF   +   +  +     + VL  +  +AR +Q +LAV G  G+GK++LR+ L
Sbjct: 13  HYQLSHDPFAARVPGFK--FFPAQRKPVLGQLHHLARYSQLLLAVTGPQGSGKTLLRQAL 70

Query: 171 LDELHNDGDISVIQPKIIDKTRATAAGICDAIISDISSEAPKRSMEAKARQVERLLMTAF 230
           +   +     SV+   I  +    AAG+   +   +S    +  M++   QV +L +T  
Sbjct: 71  VASTNKQSVQSVV---ISARGAGDAAGVLQQVAQALS--VAQAEMQSILSQVVQLGLT-- 123

Query: 231 KGGQRHVLIIEEAHDLTIPVMKYLKRFWELEDGFSK-LLGILLVGQTELFHRLDERRHYE 289
             GQ   L++++A  L    ++ L     L  G  +    + L G+  L  RLD+    +
Sbjct: 124 --GQEVYLLVDDAEQLGDSALEAL---LGLAAGTPEGRPHVFLFGEPSLLDRLDQ-MCAD 177

Query: 290 LREFI--RRCMVIEVPP-LDNDIEAYLKHKFERAG 321
           L+  +   R  VIE+ P  + +   YL  + E AG
Sbjct: 178 LQGDVEGERFHVIELQPYTEEETREYLAQRLEGAG 212