Pairwise Alignments

Query, 383 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., MSHA biogenesis protein MshM (NCBI) from Rhodospirillum rubrum S1H

 Score = 45.4 bits (106), Expect = 2e-09
 Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 30/267 (11%)

Query: 112 HFKLFRNPFINDIRAVRDIYMNEDSRYVLAAMKDVARNQGILAVVGDSGAGKSVLRRLLL 171
           HF   R+PF  +         N+    V   +  + R  G + VVG++G GKS L     
Sbjct: 10  HFGFHRHPFPAEAGLELAYAGNDSQAPVRRLLARLTRYAGPVTVVGEAGLGKSYLC---- 65

Query: 172 DELHNDGDISVIQPKIIDKTRATAAGICDAIISDISSEA----PKRSMEAKARQVERLLM 227
                D   ++++ + +   R  A  +  A +  + ++A    P+R      R +   L+
Sbjct: 66  -----DWVAALLESRAL-VVRVNATDLGGARLLPLVAQALDLDPERPAGTSPRVLTARLL 119

Query: 228 TAFKGGQRHVLIIEEAHDLTIPVMKYLKRFWELEDGFSKLLGILLVGQTELFHRLDERRH 287
                G+R VL+++ A  L+   ++ L+R   LE    +LL + L G+  L  RL     
Sbjct: 120 ALRVSGRRAVLLVDGADALSDGDLEDLRRLDALETARGRLLRVALFGRPGLRERLQ---- 175

Query: 288 YELREFIRRC--MVIEVPPLDNDIEAYLKHKFERAGCEYERIMDDSAVPALKLR-LQTRR 344
             L +  RR    V   P   +D+ +YL H+   A       +D    PA + R L+  R
Sbjct: 176 -TLPQLARRLGPGVRLTPMTRSDLTSYLDHRL--AVSRDPLWIDPVFTPAARRRLLRLAR 232

Query: 345 NQSGSLVYPQVINNLVTKAMNLCASLG 371
              G L      + L + A+ L A  G
Sbjct: 233 GVPGDL------DRLASAALYLAAGEG 253