Pairwise Alignments

Query, 383 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., peptidoglycan binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 70.9 bits (172), Expect = 9e-17
 Identities = 67/252 (26%), Positives = 117/252 (46%), Gaps = 22/252 (8%)

Query: 130 IYMNEDSRYVLAAMK-DVARNQGILAVVGDSGAGKSVLRRLLLDELHNDGDISVIQPKII 188
           +++++  R  LA +   +    G + + G+ G GK+ + R LL++L  + D + I    +
Sbjct: 22  LFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVSRCLLNQLPENTDTAFILNPSL 81

Query: 189 DKTRATAAGICDAIISDISSEAPKRSMEAKARQVERLLMTAFKGGQRHVLIIEEAHDLTI 248
            +    A  +CD +          + +  K  Q    L+   + G+  VLII+EA  L  
Sbjct: 82  TELELLAT-LCDELGVHYGESPTLKQLTDKLSQ---FLLANHEKGRNTVLIIDEAQHLRA 137

Query: 249 PVMKYLKRFWELEDGFSKLLGILLVGQTELFHRLDERRHYELREFIRRCMVIE--VPPLD 306
            V++ L+    LE    KLL ++L+GQ EL   L   +  ELR+  +R       +P   
Sbjct: 138 EVLEQLRLLTNLETDTKKLLQVILIGQPELQQLL---KRQELRQLAQRITARYHLLPLTQ 194

Query: 307 NDIEAYLKHKFERAGCEYERIMDDSAVPALKLRLQTRRNQSGSLVYPQVINNLVTKAMNL 366
            +I  Y++H+ + AG  +E +   SA+       +T    SG +  P++IN L  +A  L
Sbjct: 195 QEIALYVQHRLQVAG-RHEPLFHRSAI-------KTLHQYSGGI--PRLINLLCERA--L 242

Query: 367 CASLGEDKVNED 378
            A   + KV  D
Sbjct: 243 MAGYAQSKVPID 254