Pairwise Alignments

Query, 383 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., MSHA biogenesis protein MshM (RefSeq) from Shewanella loihica PV-4

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 14/227 (6%)

Query: 150 QGILAVVGDSGAGKSVLRRLLLDELHNDGDISVIQPKIIDKTRATAAGICDAIISDISSE 209
           +G + V G+ G GK+++ R LL+++      + +    +  +    A   +  +   S++
Sbjct: 43  EGFIKVTGEVGTGKTLICRKLLNDIPERFHCAYLPNPYLSPSELRWALALELGLK-YSAD 101

Query: 210 APKRSMEAKARQVERLLMTAFKGGQRHVLIIEEAHDLTIPVMKYLKRFWELEDGFSKLLG 269
             ++ + +    +++ L+     G   VL+++EA  L    ++ L+ F  LE    KLL 
Sbjct: 102 LDQQRLTSL---IQQQLIALSAHGHSIVLVLDEAQALPDESLEALRLFTNLETESRKLLQ 158

Query: 270 ILLVGQTELFHRLDERRHYELREFIRRCMVIEVPPLDNDIEAYLKHKFERAGCEYERIMD 329
           ++L GQ EL  RL + +  +LR+ I     +  P   ++  AY  H+ E AG   E +  
Sbjct: 159 VVLFGQPELDTRLQQPQFRQLRQRITFSYQLR-PMTADETRAYQAHRLEVAGYRGEGLFG 217

Query: 330 DSAVPALKLRLQTRRNQSGSLVYPQVINNLVTKAMNLCASLGEDKVN 376
                      ++RR    +   P++IN L  KA+ L    G DKV+
Sbjct: 218 ---------ARESRRIARAARGIPRLINILSHKALLLAYGEGADKVS 255