Pairwise Alignments

Query, 383 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., conserved domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 71/296 (23%), Positives = 116/296 (39%), Gaps = 18/296 (6%)

Query: 90  PQTETNRELELENPMLTQEAMKHFKLFRNPFINDIRAVRDIYMNEDSRYVLAAMKDVARN 149
           P   TNR    E  M   + ++   L + PF      +      E    +      +   
Sbjct: 21  PVHATNRNTPRETSM---QYLEMLGLAQEPFSTSPDPLAYYRAPEHEHCLHRLEVSIRLK 77

Query: 150 QGILAVVGDSGAGKSVLRRLLLDELHNDGDISVIQPKIID----KTRATAAGICDAII-S 204
           +G+  V+GD G GKS L R LL  L  DG   +I   I+D         A  IC  +   
Sbjct: 78  RGLNVVIGDVGTGKSTLSRCLLRAL--DGQEDIIPHLILDPGFESADEFARYICRLLADG 135

Query: 205 DISSEAPKRSMEAKARQVERLLMTAFKGGQRHVLIIEEAHDLTIPVMKYLKRFWELEDGF 264
            +    P+R      +    L   A + G+  +L I+E   L    ++ L+     E   
Sbjct: 136 PVPDTLPRRDCIEAIQNA--LFSLAVERGRIVLLCIDEGQKLAPDCLEVLRELLNYETNT 193

Query: 265 SKLLGILLVGQTELFHRLDERRHYELREFIRRCMVIEVPPLD-NDIEAYLKHKFERAGCE 323
            KLL I++ GQ EL   +D   +++ R  I   +V+   PLD  +    ++H+   AG  
Sbjct: 194 EKLLQIVIFGQRELEEVIDGLPNFKDR--INEYLVLR--PLDRRETIRLVRHRLRLAGGP 249

Query: 324 Y-ERIMDDSAVPALKLRLQTRRNQSGSLVYPQVINNLVTKAMNLCASLGEDKVNED 378
             ER+    A+ A+    +    +   L +  V+  L+T    + A    D +  D
Sbjct: 250 AGERLFTLGALLAVHRATRGYPRRIMRLCHQLVMTLLITNKPRITARSVRDFLQRD 305