Pairwise Alignments

Query, 124 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 145 a.a., prophage MuSo2, positive regulator of late transcription, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 46.2 bits (108), Expect = 2e-10
 Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)

Query: 34  YPELLSDVHDIFLGVIEDAGIEDNGLALHLVFKLMEYGNGVQFYLPKPDSIVKTIIKKMM 93
           +P  +S ++ +F   +    + D  +A+ L+  + +   GVQFYLP+   +   I+   +
Sbjct: 44  WPVAMSQLYQLFKRDLARHDV-DTKIAISLLNSICKEFGGVQFYLPRGCQLEIEIMNLSI 102

Query: 94  KNDFNGSNYVELAKRYQCSTNHVRRVI 120
            ++F G N  ELA++Y  S  H+ RVI
Sbjct: 103 WHEFKGDNVEELARKYNKSMQHIWRVI 129