Pairwise Alignments

Query, 346 a.a., phage tail tape measure protein from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., conserved domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  120 bits (301), Expect = 8e-32
 Identities = 87/270 (32%), Positives = 131/270 (48%), Gaps = 27/270 (10%)

Query: 61  LFITGAAAV-----GFERTFVKTAAEFERYQTMLNKL-QGSPEAGAKAMAWIEEFTQNTP 114
           L  TG+AA       F+  FV TA++FER++T+L  L QG      K M WI +F   TP
Sbjct: 55  LAATGSAAALGLGYAFKTQFVDTASQFERFETILTTLNQGDTGKAKKEMGWISDFAAKTP 114

Query: 115 YAIDEVTQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAE-TVEGIATALGQAWTKGKLQ 173
           Y + EVT SFV+L+++G+DP  G ++++ D A+ +G   E  VE IA A+          
Sbjct: 115 YELAEVTDSFVKLRSYGLDPTKGLLRTLGDTASSMGKPLEQAVEAIADAV---------- 164

Query: 174 SEEALQLLERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLG-RDAIRALIKQM 232
           + E  +L E G+         +++ G      +T       S   K   R AI+A + ++
Sbjct: 165 TGENERLKEFGI--------VARKTGEKIVYSYTDASGKQASLMAKANDRAAIQATLTKI 216

Query: 233 GKESAGAAKE-QMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKT 291
             E  G   E Q  T+ GM+SN+ D W  F   VM +G F  +K +L   L  +DEM   
Sbjct: 217 WAEKYGGGMEAQSKTFGGMVSNLSDSWSRFTNMVMSNGVFDWMKGKLEGVLAKIDEMAGD 276

Query: 292 GEYDEFVDKVGRDLVEAFKSAAAAAREIKE 321
           G    +   +G  L   F +A  A  ++ E
Sbjct: 277 GSLQAWAKDIGEKLTRFFDAAWNALPKVWE 306