Pairwise Alignments

Query, 231 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  118 bits (295), Expect = 3e-31
 Identities = 86/237 (36%), Positives = 115/237 (48%), Gaps = 30/237 (12%)

Query: 5   ANSLAETVGGYGNLAKILASIYAINKMLRIGSPLLKG----GAMIGDMVLGGKKGAAGAG 60
           A+++A+ VGGY NLAKIL S+Y +NK LRIG+PLLKG    G  + D   GG  G  G G
Sbjct: 337 ASAIADAVGGYENLAKILLSVYMLNKALRIGAPLLKGAIGAGGFVFDKATGG-LGGKGKG 395

Query: 61  SLSALGATPVYVVNMPNGGLGG--PDVNFPDNKKPNKS----LFNASNLANIPLIGWASY 114
            +S LG  PVYVVNM  GG+GG  PD   P   K   S    +FN  NLA +  +G+A+ 
Sbjct: 396 GISDLGVMPVYVVNMGAGGMGGGLPDGVDPTGTKKGASKASRIFNLQNLAALGTVGYAAN 455

Query: 115 ELADLTDSVLSSNFDGYREADAKFTTKMKAFFGDKEAQAQDVQYYGADPAKYEVKPMSPP 174
                 D  L  N     E D      + A  G  +      +++   P+      +   
Sbjct: 456 MTYQNPDDWLPFNLRRKSELDPTALHGIPAAPGLLDVLDDFKRWFAGSPSPDAANVV--- 512

Query: 175 EYMTGGYNRSPISTPSSYLAAQAGEMKLKVEVSDDRVKVTPTYLPKGFSVDPDTGIN 231
                    + ++T  S LA       L + VSDDR+KV P  +P G  +D DTG N
Sbjct: 513 ---------NAMNTVGSKLA-------LDISVSDDRIKVKPKSIPPGIVIDADTGTN 553