Pairwise Alignments

Query, 321 a.a., sialic acid-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Pseudomonas fluorescens FW300-N2E2

 Score =  137 bits (344), Expect = 5e-37
 Identities = 77/301 (25%), Positives = 145/301 (48%), Gaps = 1/301 (0%)

Query: 7   ITIAILTLSAAASVNAATTLKMGMQASVGSVEYNSAKMLADTLEEMSQGEIKLALYPSAQ 66
           + IA L L+  A    A  +K+      G     + + +  TLE+ S GE+K   +P   
Sbjct: 7   LLIAALPLAFLAQAAHALDIKIADIHPKGYPTVVAEESMGKTLEKESNGELKFKYFPGGV 66

Query: 67  LGDDRAMLQQLTLGDLDITYAEFGRMGLWIPRAEAVMLPYVAKDFDHLRRMFESDFGQGV 126
           LG ++ +++Q+  G + ++    G +G  +P      +P++ +D  H+R + + D G  +
Sbjct: 67  LGSEKEVIEQMQTGAVQMSRVSLGIVGPVVPDVNVFNMPFIFRDQAHMRAVIDGDVGDAI 126

Query: 127 RDEMLQ-KFNWRALDTWYNGTRETTSNRPLNSIEDFKGLKLRVPNAKQNLNYAKLSGASP 185
            D +   +F   AL     GTR   + +P++ +ED KG+K+RV      +      GA+ 
Sbjct: 127 LDRITNSEFGLVALAWMDGGTRNLYTKKPVHKLEDLKGMKIRVQGNPMFIETFNAMGANG 186

Query: 186 TPMSFSEVYLALQTNAVDGQENPLPTIKTMKFYEVQKNLAMTHHIVNDQMVIISESTWQK 245
             M   E++ ALQT  +DG EN  PT+     Y+  K  ++T H++  + +++S+ TW K
Sbjct: 187 IAMDTGEIFSALQTGVIDGAENNPPTLLEHNHYQNAKYYSLTGHLILPEPIVMSKITWNK 246

Query: 246 LSDTDKDIIQKAVQKVGDAHTQTVKTQEAELVSFFKSEGINVTYPDLEPFREAMQPLYKE 305
           L+   +D+++KA +            +        K+ G+     D +PF +A  P+  +
Sbjct: 247 LTPEQQDMVKKAAKAAQAEERVLWDKKSTASEEKLKAAGVEFITVDKKPFYDATAPIRAK 306

Query: 306 F 306
           +
Sbjct: 307 Y 307